Protein–RNA interactions for Protein: P59235

Nup43, Nucleoporin Nup43, mousemouse

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup43P59235 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC10.5□□□□□ -0.73
Nup43P59235 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC10.5□□□□□ -0.73
Nup43P59235 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Nup43P59235 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nup43P59235 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Nup43P59235 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nup43P59235 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Nup43P59235 Gm17213-201ENSMUST00000165161 1360 ntBASIC10.5□□□□□ -0.73
Nup43P59235 Gm5308-201ENSMUST00000196752 1354 ntBASIC10.5□□□□□ -0.73
Nup43P59235 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nup43P59235 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Nup43P59235 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nup43P59235 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nup43P59235 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Nup43P59235 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC10.5□□□□□ -0.73
Nup43P59235 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nup43P59235 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nup43P59235 Cyp2a22-201ENSMUST00000170227 1796 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nup43P59235 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nup43P59235 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nup43P59235 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nup43P59235 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Nup43P59235 Gm43482-201ENSMUST00000202797 1861 ntBASIC10.49□□□□□ -0.73
Nup43P59235 Gatsl2-201ENSMUST00000016088 7367 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nup43P59235 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Nup43P59235 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Nup43P59235 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nup43P59235 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nup43P59235 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Nup43P59235 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC10.49□□□□□ -0.73
Nup43P59235 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC10.49□□□□□ -0.73
Nup43P59235 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Nup43P59235 Gm8876-201ENSMUST00000120768 1122 ntBASIC10.49□□□□□ -0.73
Nup43P59235 Gm13284-201ENSMUST00000121020 547 ntBASIC10.49□□□□□ -0.73
Nup43P59235 Gm12176-201ENSMUST00000121420 875 ntBASIC10.49□□□□□ -0.73
Nup43P59235 Gm13182-201ENSMUST00000122241 312 ntBASIC10.49□□□□□ -0.73
Nup43P59235 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC10.49□□□□□ -0.73
Nup43P59235 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC10.49□□□□□ -0.73
Nup43P59235 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Nup43P59235 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Nup43P59235 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC10.49□□□□□ -0.73
Nup43P59235 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC10.49□□□□□ -0.73
Nup43P59235 Gm24514-201ENSMUST00000174961 285 ntBASIC10.49□□□□□ -0.73
Nup43P59235 Gm6407-201ENSMUST00000176468 549 ntBASIC10.49□□□□□ -0.73
Nup43P59235 Gm4895-201ENSMUST00000181646 1137 ntBASIC10.49□□□□□ -0.73
Nup43P59235 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC10.49□□□□□ -0.73
Nup43P59235 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Nup43P59235 Gm8365-201ENSMUST00000197334 648 ntBASIC10.49□□□□□ -0.73
Nup43P59235 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC10.49□□□□□ -0.73
Nup43P59235 Gm8436-201ENSMUST00000210152 1080 ntBASIC10.49□□□□□ -0.73
Nup43P59235 Gm5749-201ENSMUST00000210673 1090 ntBASIC10.49□□□□□ -0.73
Nup43P59235 Gm30671-201ENSMUST00000214898 318 ntBASIC10.49□□□□□ -0.73
Nup43P59235 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC10.49□□□□□ -0.73
Nup43P59235 AC102368.1-201ENSMUST00000227161 892 ntBASIC10.49□□□□□ -0.73
Nup43P59235 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nup43P59235 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Nup43P59235 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nup43P59235 Prl8a1-201ENSMUST00000006664 864 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nup43P59235 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nup43P59235 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nup43P59235 4921507G05Rik-201ENSMUST00000181348 1653 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Nup43P59235 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC10.49□□□□□ -0.73
Nup43P59235 Ikbkb-202ENSMUST00000063401 3977 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Nup43P59235 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Nup43P59235 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nup43P59235 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nup43P59235 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nup43P59235 Gm8369-201ENSMUST00000079855 1374 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Nup43P59235 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC10.49□□□□□ -0.73
Nup43P59235 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nup43P59235 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nup43P59235 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nup43P59235 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC10.49□□□□□ -0.73
Nup43P59235 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
Nup43P59235 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Nup43P59235 Pde3a-201ENSMUST00000043259 12302 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Nup43P59235 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Nup43P59235 AC122273.1-201ENSMUST00000213634 2327 ntBASIC10.49□□□□□ -0.73
Nup43P59235 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup43P59235 Gm14685-202ENSMUST00000179117 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup43P59235 3425401B19Rik-201ENSMUST00000096038 5547 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup43P59235 Ptpn21-202ENSMUST00000170188 5562 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup43P59235 Gm6024-201ENSMUST00000117850 1558 ntBASIC10.48□□□□□ -0.73
Nup43P59235 Lats2-207ENSMUST00000173990 3834 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nup43P59235 Reps1-210ENSMUST00000164556 2537 ntAPPRIS ALT1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup43P59235 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.48□□□□□ -0.73
Nup43P59235 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup43P59235 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup43P59235 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup43P59235 Tmprss6-201ENSMUST00000017086 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup43P59235 Morc3-206ENSMUST00000202261 4175 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup43P59235 Morc3-201ENSMUST00000044068 4178 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Nup43P59235 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup43P59235 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC10.48□□□□□ -0.73
Nup43P59235 Ranbp10-201ENSMUST00000041400 5308 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup43P59235 Fam26e-201ENSMUST00000069125 5323 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Nup43P59235 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC10.48□□□□□ -0.73
Nup43P59235 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Nup43P59235 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC10.48□□□□□ -0.73
Nup43P59235 Tprkb-203ENSMUST00000113751 692 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms