Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Gm34655-202ENSMUST00000215259 877 ntTSL 3 BASIC11.31□□□□□ -0.6
Ddx6P54823 AC133499.1-201ENSMUST00000227778 1097 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Ddx6P54823 Try5-201ENSMUST00000064324 801 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ddx6P54823 Acot13-201ENSMUST00000006900 721 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ddx6P54823 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Ddx6P54823 Itsn2-211ENSMUST00000219007 4977 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ddx6P54823 Gm11033-201ENSMUST00000127757 1445 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ddx6P54823 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ddx6P54823 Ghsr-201ENSMUST00000057186 4433 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ddx6P54823 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ddx6P54823 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ddx6P54823 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ddx6P54823 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ddx6P54823 Ndrg2-201ENSMUST00000004673 2099 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ddx6P54823 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
Ddx6P54823 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ddx6P54823 Fzd6-201ENSMUST00000022906 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ddx6P54823 Npr2-202ENSMUST00000107874 3480 ntTSL 5 BASIC11.3□□□□□ -0.6
Ddx6P54823 Cdip1-202ENSMUST00000117713 1964 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ddx6P54823 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Ddx6P54823 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ddx6P54823 Gm42498-201ENSMUST00000199981 1372 ntBASIC11.3□□□□□ -0.6
Ddx6P54823 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ddx6P54823 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC11.3□□□□□ -0.6
Ddx6P54823 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC11.3□□□□□ -0.6
Ddx6P54823 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ddx6P54823 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ddx6P54823 Dcaf12-201ENSMUST00000030145 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ddx6P54823 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC11.3□□□□□ -0.6
Ddx6P54823 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ddx6P54823 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ddx6P54823 Usp2-208ENSMUST00000177054 2370 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ddx6P54823 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC11.3□□□□□ -0.6
Ddx6P54823 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ddx6P54823 Hmgn2-201ENSMUST00000100472 881 ntAPPRIS ALT1 TSL 2 BASIC11.3□□□□□ -0.6
Ddx6P54823 Rad54b-203ENSMUST00000108306 652 ntTSL 3 BASIC11.3□□□□□ -0.6
Ddx6P54823 Gm25545-201ENSMUST00000122673 323 ntBASIC11.3□□□□□ -0.6
Ddx6P54823 Slfn5os-201ENSMUST00000127074 574 ntTSL 2 BASIC11.3□□□□□ -0.6
Ddx6P54823 Gm24074-201ENSMUST00000158178 260 ntBASIC11.3□□□□□ -0.6
Ddx6P54823 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC11.3□□□□□ -0.6
Ddx6P54823 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC11.3□□□□□ -0.6
Ddx6P54823 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC11.3□□□□□ -0.6
Ddx6P54823 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ddx6P54823 Gm37723-201ENSMUST00000194480 565 ntBASIC11.3□□□□□ -0.6
Ddx6P54823 Gm30731-201ENSMUST00000203909 825 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ddx6P54823 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC11.3□□□□□ -0.6
Ddx6P54823 AC122860.1-201ENSMUST00000217669 773 ntTSL 3 BASIC11.3□□□□□ -0.6
Ddx6P54823 CT025689.1-201ENSMUST00000225214 283 ntBASIC11.3□□□□□ -0.6
Ddx6P54823 Gm26782-203ENSMUST00000227103 751 ntBASIC11.3□□□□□ -0.6
Ddx6P54823 Gm5449-201ENSMUST00000081132 357 ntBASIC11.3□□□□□ -0.6
Ddx6P54823 Rpl3-201ENSMUST00000081650 1293 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ddx6P54823 Rbm14-202ENSMUST00000113793 3508 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ddx6P54823 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ddx6P54823 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ddx6P54823 Bpifb4-201ENSMUST00000099181 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ddx6P54823 Gm5766-201ENSMUST00000160520 1977 ntBASIC11.3□□□□□ -0.6
Ddx6P54823 Ccdc114-201ENSMUST00000038720 2460 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ddx6P54823 Erich3-203ENSMUST00000189969 3460 ntBASIC11.3□□□□□ -0.6
Ddx6P54823 Gm13871-202ENSMUST00000107319 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ddx6P54823 Gm11757-202ENSMUST00000107321 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ddx6P54823 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ddx6P54823 Txndc9-208ENSMUST00000195247 1699 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ddx6P54823 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ddx6P54823 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ddx6P54823 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ddx6P54823 Tnfrsf13b-201ENSMUST00000010286 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ddx6P54823 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ddx6P54823 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ddx6P54823 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ddx6P54823 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ddx6P54823 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
Ddx6P54823 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Ddx6P54823 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ddx6P54823 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ddx6P54823 Il1rap-206ENSMUST00000174202 2306 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ddx6P54823 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC11.29□□□□□ -0.6
Ddx6P54823 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC11.29□□□□□ -0.6
Ddx6P54823 Gm22594-201ENSMUST00000104251 130 ntBASIC11.29□□□□□ -0.6
Ddx6P54823 Gsta3-202ENSMUST00000121676 894 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Ddx6P54823 Gm14222-201ENSMUST00000128681 575 ntTSL 2 BASIC11.29□□□□□ -0.6
Ddx6P54823 Ccnb1-ps-201ENSMUST00000155338 1287 ntBASIC11.29□□□□□ -0.6
Ddx6P54823 Gm20414-201ENSMUST00000172918 646 ntBASIC11.29□□□□□ -0.6
Ddx6P54823 Ccnb1-207ENSMUST00000174038 1182 ntTSL 5 BASIC11.29□□□□□ -0.6
Ddx6P54823 Gm9625-201ENSMUST00000180422 955 ntBASIC11.29□□□□□ -0.6
Ddx6P54823 4732414G09Rik-202ENSMUST00000180695 408 ntTSL 3 BASIC11.29□□□□□ -0.6
Ddx6P54823 Gm29521-201ENSMUST00000187061 745 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ddx6P54823 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ddx6P54823 AC164556.1-201ENSMUST00000221318 751 ntBASIC11.29□□□□□ -0.6
Ddx6P54823 Fam83a-201ENSMUST00000050374 1189 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ddx6P54823 Actg1-201ENSMUST00000062147 876 ntTSL 3 BASIC11.29□□□□□ -0.6
Ddx6P54823 Taar5-201ENSMUST00000092659 1014 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Ddx6P54823 Gm6478-201ENSMUST00000099450 742 ntBASIC11.29□□□□□ -0.6
Ddx6P54823 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ddx6P54823 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ddx6P54823 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Ddx6P54823 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ddx6P54823 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ddx6P54823 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ddx6P54823 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Ddx6P54823 Snx27-208ENSMUST00000200642 1308 ntTSL 5 BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms