Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC10.96□□□□□ -0.66
Pdx1P52946 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pdx1P52946 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC10.96□□□□□ -0.66
Pdx1P52946 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Pdx1P52946 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pdx1P52946 Slc25a48-201ENSMUST00000021971 3374 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Pdx1P52946 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Pdx1P52946 Copz1-201ENSMUST00000100162 1669 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pdx1P52946 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pdx1P52946 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Pdx1P52946 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pdx1P52946 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Pdx1P52946 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Pdx1P52946 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pdx1P52946 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pdx1P52946 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pdx1P52946 Npas2-201ENSMUST00000056815 4236 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pdx1P52946 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pdx1P52946 4732491K20Rik-201ENSMUST00000181774 3142 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pdx1P52946 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pdx1P52946 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pdx1P52946 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC10.95□□□□□ -0.66
Pdx1P52946 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Pdx1P52946 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pdx1P52946 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC10.95□□□□□ -0.66
Pdx1P52946 Gm4895-201ENSMUST00000181646 1137 ntBASIC10.95□□□□□ -0.66
Pdx1P52946 Uba52-ps-201ENSMUST00000183770 379 ntBASIC10.95□□□□□ -0.66
Pdx1P52946 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pdx1P52946 Gm4753-201ENSMUST00000188327 1255 ntBASIC10.95□□□□□ -0.66
Pdx1P52946 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC10.95□□□□□ -0.66
Pdx1P52946 Gm8365-201ENSMUST00000197334 648 ntBASIC10.95□□□□□ -0.66
Pdx1P52946 Gm5302-201ENSMUST00000202130 796 ntBASIC10.95□□□□□ -0.66
Pdx1P52946 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC10.95□□□□□ -0.66
Pdx1P52946 Gm31166-202ENSMUST00000210638 1268 ntTSL 3 BASIC10.95□□□□□ -0.66
Pdx1P52946 CT009527.1-201ENSMUST00000224205 339 ntBASIC10.95□□□□□ -0.66
Pdx1P52946 Gm25580-201ENSMUST00000083409 327 ntBASIC10.95□□□□□ -0.66
Pdx1P52946 Mirlet7i-201ENSMUST00000083472 85 ntBASIC10.95□□□□□ -0.66
Pdx1P52946 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pdx1P52946 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pdx1P52946 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pdx1P52946 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pdx1P52946 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pdx1P52946 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC10.95□□□□□ -0.66
Pdx1P52946 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC10.95□□□□□ -0.66
Pdx1P52946 Dtx3l-202ENSMUST00000114885 2648 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pdx1P52946 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pdx1P52946 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Pdx1P52946 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pdx1P52946 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pdx1P52946 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pdx1P52946 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC10.95□□□□□ -0.66
Pdx1P52946 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pdx1P52946 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pdx1P52946 BC034090-201ENSMUST00000035914 3797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pdx1P52946 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Pdx1P52946 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pdx1P52946 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Pdx1P52946 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Pdx1P52946 4833411C07Rik-202ENSMUST00000207914 1568 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pdx1P52946 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Pdx1P52946 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Pdx1P52946 Gabra1-201ENSMUST00000020707 4688 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pdx1P52946 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pdx1P52946 AC125409.1-201ENSMUST00000223213 3370 ntBASIC10.94□□□□□ -0.66
Pdx1P52946 AC130823.1-201ENSMUST00000228929 1549 ntBASIC10.94□□□□□ -0.66
Pdx1P52946 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pdx1P52946 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pdx1P52946 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pdx1P52946 Gm33366-201ENSMUST00000195583 3827 ntBASIC10.94□□□□□ -0.66
Pdx1P52946 Gm3765-201ENSMUST00000130985 1447 ntBASIC10.94□□□□□ -0.66
Pdx1P52946 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pdx1P52946 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pdx1P52946 Dennd1c-201ENSMUST00000011623 2520 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pdx1P52946 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pdx1P52946 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pdx1P52946 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pdx1P52946 Dclk2-209ENSMUST00000195561 3486 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pdx1P52946 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pdx1P52946 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pdx1P52946 Gtf2i-202ENSMUST00000082057 4375 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Pdx1P52946 Igkv3-10-201ENSMUST00000103397 356 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Pdx1P52946 Gm14892-201ENSMUST00000117636 267 ntBASIC10.94□□□□□ -0.66
Pdx1P52946 Gm13937-201ENSMUST00000121000 988 ntBASIC10.94□□□□□ -0.66
Pdx1P52946 Gm3828-201ENSMUST00000121817 257 ntBASIC10.94□□□□□ -0.66
Pdx1P52946 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC10.94□□□□□ -0.66
Pdx1P52946 Mir1956-201ENSMUST00000157748 65 ntBASIC10.94□□□□□ -0.66
Pdx1P52946 Gm24514-201ENSMUST00000174961 285 ntBASIC10.94□□□□□ -0.66
Pdx1P52946 Gm9369-201ENSMUST00000196009 733 ntBASIC10.94□□□□□ -0.66
Pdx1P52946 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC10.94□□□□□ -0.66
Pdx1P52946 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC10.94□□□□□ -0.66
Pdx1P52946 Gm8436-201ENSMUST00000210152 1080 ntBASIC10.94□□□□□ -0.66
Pdx1P52946 Gm5749-201ENSMUST00000210673 1090 ntBASIC10.94□□□□□ -0.66
Pdx1P52946 AC154826.1-201ENSMUST00000217369 498 ntTSL 5 BASIC10.94□□□□□ -0.66
Pdx1P52946 Id2-203ENSMUST00000222667 958 ntBASIC10.94□□□□□ -0.66
Pdx1P52946 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pdx1P52946 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pdx1P52946 Gm23680-201ENSMUST00000083162 164 ntBASIC10.94□□□□□ -0.66
Pdx1P52946 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Pdx1P52946 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Pdx1P52946 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms