Protein–RNA interactions for Protein: P50228

Cxcl5, C-X-C motif chemokine 5, mousemouse

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl5P50228 Nipal3-202ENSMUST00000105856 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cxcl5P50228 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cxcl5P50228 Gm35715-201ENSMUST00000197421 2054 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Cxcl5P50228 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Cxcl5P50228 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Cxcl5P50228 Sgsm1-202ENSMUST00000057209 4339 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Cxcl5P50228 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cxcl5P50228 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Cxcl5P50228 Sez6l-205ENSMUST00000212480 5857 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Cxcl5P50228 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Cxcl5P50228 Scyl2-204ENSMUST00000174252 4817 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cxcl5P50228 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cxcl5P50228 Zfp775-203ENSMUST00000204095 4143 ntAPPRIS P1 TSL 2 BASIC9.71□□□□□ -0.86
Cxcl5P50228 1600014C10Rik-202ENSMUST00000165308 3335 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Cxcl5P50228 1600014C10Rik-204ENSMUST00000178207 3341 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Cxcl5P50228 Gm15883-201ENSMUST00000153562 1690 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Cxcl5P50228 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC9.71□□□□□ -0.86
Cxcl5P50228 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Cxcl5P50228 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Cxcl5P50228 Npy5r-202ENSMUST00000211920 1715 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Cxcl5P50228 Cd247-206ENSMUST00000161971 2713 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cxcl5P50228 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cxcl5P50228 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cxcl5P50228 Gm45041-201ENSMUST00000207366 3108 ntBASIC9.7□□□□□ -0.86
Cxcl5P50228 Mindy4-201ENSMUST00000053094 4270 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cxcl5P50228 Park2-209ENSMUST00000191124 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cxcl5P50228 E130308A19Rik-202ENSMUST00000070150 10856 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cxcl5P50228 Top3a-204ENSMUST00000120417 2318 ntTSL 5 BASIC9.7□□□□□ -0.86
Cxcl5P50228 Tceal8-204ENSMUST00000163584 2358 ntAPPRIS P1 TSL 3 BASIC9.7□□□□□ -0.86
Cxcl5P50228 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cxcl5P50228 Tacr1-201ENSMUST00000032122 5021 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cxcl5P50228 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cxcl5P50228 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cxcl5P50228 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cxcl5P50228 Gm11960-201ENSMUST00000122068 925 ntBASIC9.7□□□□□ -0.86
Cxcl5P50228 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC9.7□□□□□ -0.86
Cxcl5P50228 Ccdc188-201ENSMUST00000167061 747 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Cxcl5P50228 Trmt112-204ENSMUST00000174786 646 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cxcl5P50228 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC9.7□□□□□ -0.86
Cxcl5P50228 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Cxcl5P50228 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC9.7□□□□□ -0.86
Cxcl5P50228 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC9.7□□□□□ -0.86
Cxcl5P50228 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC9.7□□□□□ -0.86
Cxcl5P50228 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cxcl5P50228 Gm9797-202ENSMUST00000218003 294 ntBASIC9.7□□□□□ -0.86
Cxcl5P50228 Prss52-201ENSMUST00000022537 1064 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cxcl5P50228 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cxcl5P50228 Rpp38-201ENSMUST00000062672 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cxcl5P50228 Lyz1-201ENSMUST00000092162 1263 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cxcl5P50228 AC154537.1-201ENSMUST00000226101 1304 ntBASIC9.7□□□□□ -0.86
Cxcl5P50228 Cntrl-201ENSMUST00000028235 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cxcl5P50228 Zfp943-201ENSMUST00000055349 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cxcl5P50228 Gm6170-201ENSMUST00000187672 1388 ntBASIC9.7□□□□□ -0.86
Cxcl5P50228 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cxcl5P50228 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cxcl5P50228 Sema4g-203ENSMUST00000179305 4290 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cxcl5P50228 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cxcl5P50228 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cxcl5P50228 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cxcl5P50228 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cxcl5P50228 Pnpla3-201ENSMUST00000045289 4640 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Cxcl5P50228 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cxcl5P50228 AC121574.1-201ENSMUST00000228770 3132 ntBASIC9.7□□□□□ -0.86
Cxcl5P50228 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cxcl5P50228 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC9.7□□□□□ -0.86
Cxcl5P50228 Gm38001-201ENSMUST00000192900 3761 ntBASIC9.7□□□□□ -0.86
Cxcl5P50228 Sqor-202ENSMUST00000110506 1985 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cxcl5P50228 Bpifb9a-201ENSMUST00000088924 2065 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cxcl5P50228 Zfp873-203ENSMUST00000209622 2284 ntTSL 2 BASIC9.7□□□□□ -0.86
Cxcl5P50228 Gm10531-201ENSMUST00000193527 2303 ntBASIC9.7□□□□□ -0.86
Cxcl5P50228 Gm16348-202ENSMUST00000146654 2385 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Cxcl5P50228 Duoxa1-203ENSMUST00000110538 2467 ntTSL 5 BASIC9.7□□□□□ -0.86
Cxcl5P50228 Nrros-204ENSMUST00000126869 2540 ntAPPRIS ALT2 TSL 1 (best) BASIC9.7□□□□□ -0.86
Cxcl5P50228 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC9.69□□□□□ -0.86
Cxcl5P50228 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Cxcl5P50228 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cxcl5P50228 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC9.69□□□□□ -0.86
Cxcl5P50228 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cxcl5P50228 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cxcl5P50228 Arhgef10-202ENSMUST00000110800 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cxcl5P50228 Mir877-201ENSMUST00000104738 85 ntBASIC9.69□□□□□ -0.86
Cxcl5P50228 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Cxcl5P50228 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Cxcl5P50228 Mapkap1-203ENSMUST00000113126 3018 ntAPPRIS P2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cxcl5P50228 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Cxcl5P50228 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cxcl5P50228 Gm15711-201ENSMUST00000118889 535 ntBASIC9.69□□□□□ -0.86
Cxcl5P50228 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC9.69□□□□□ -0.86
Cxcl5P50228 Gm12749-201ENSMUST00000122138 1159 ntBASIC9.69□□□□□ -0.86
Cxcl5P50228 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cxcl5P50228 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Cxcl5P50228 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC9.69□□□□□ -0.86
Cxcl5P50228 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC9.69□□□□□ -0.86
Cxcl5P50228 BC004004-203ENSMUST00000149405 1402 ntAPPRIS P1 TSL 5 BASIC9.69□□□□□ -0.86
Cxcl5P50228 Rasal1-205ENSMUST00000156722 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cxcl5P50228 Gm26047-201ENSMUST00000157308 113 ntBASIC9.69□□□□□ -0.86
Cxcl5P50228 Gm24749-201ENSMUST00000157838 343 ntBASIC9.69□□□□□ -0.86
Cxcl5P50228 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC9.69□□□□□ -0.86
Cxcl5P50228 Trav13d-3-201ENSMUST00000179512 391 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Cxcl5P50228 Trav13n-3-201ENSMUST00000179580 337 ntAPPRIS P1 BASIC9.69□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms