Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Timp3P39876 Myo7a-201ENSMUST00000084979 6849 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Timp3P39876 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Timp3P39876 Gm14005-209ENSMUST00000224993 1832 ntBASIC9.16□□□□□ -0.94
Timp3P39876 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Timp3P39876 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Timp3P39876 Ccdc15-206ENSMUST00000217238 1747 ntAPPRIS ALT2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Timp3P39876 Atl2-202ENSMUST00000112437 3371 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Timp3P39876 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC9.16□□□□□ -0.94
Timp3P39876 Gm10465-201ENSMUST00000223133 3334 ntTSL 1 (best) BASIC9.16□□□□□ -0.94
Timp3P39876 Baiap3-206ENSMUST00000182825 3862 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Timp3P39876 Gm37859-201ENSMUST00000195529 2173 ntBASIC9.16□□□□□ -0.94
Timp3P39876 Gphb5-201ENSMUST00000051079 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Timp3P39876 Zfp114-203ENSMUST00000206547 3154 ntAPPRIS P2 TSL 1 (best) BASIC9.16□□□□□ -0.94
Timp3P39876 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Timp3P39876 Mid1-214ENSMUST00000163810 3689 ntAPPRIS P1 TSL 5 BASIC9.16□□□□□ -0.94
Timp3P39876 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC9.16□□□□□ -0.94
Timp3P39876 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC9.16□□□□□ -0.94
Timp3P39876 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC9.16□□□□□ -0.94
Timp3P39876 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Timp3P39876 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Timp3P39876 Slc9a8-201ENSMUST00000047815 4521 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Timp3P39876 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Timp3P39876 Sp140-201ENSMUST00000080204 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Timp3P39876 D830039M14Rik-202ENSMUST00000217740 3362 ntBASIC9.15□□□□□ -0.94
Timp3P39876 Scn10a-202ENSMUST00000213392 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Timp3P39876 Pip4k2c-201ENSMUST00000013970 3307 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Timp3P39876 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Timp3P39876 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Timp3P39876 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Timp3P39876 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Timp3P39876 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Timp3P39876 Dopey2-207ENSMUST00000227156 7340 ntBASIC9.15□□□□□ -0.94
Timp3P39876 Plekhn1-204ENSMUST00000218699 3196 ntTSL 2 BASIC9.15□□□□□ -0.94
Timp3P39876 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Timp3P39876 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Timp3P39876 Rab30-202ENSMUST00000107179 1304 ntTSL 5 BASIC9.15□□□□□ -0.94
Timp3P39876 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Timp3P39876 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC9.15□□□□□ -0.94
Timp3P39876 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Timp3P39876 Nfx1-201ENSMUST00000030133 4349 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Timp3P39876 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Timp3P39876 Xkr6-202ENSMUST00000120820 1702 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Timp3P39876 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC9.15□□□□□ -0.94
Timp3P39876 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC9.15□□□□□ -0.94
Timp3P39876 Gm12798-201ENSMUST00000124786 666 ntTSL 5 BASIC9.15□□□□□ -0.94
Timp3P39876 Bach2it1-201ENSMUST00000133451 481 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Timp3P39876 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Timp3P39876 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Timp3P39876 Elof1-202ENSMUST00000166335 1053 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Timp3P39876 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Timp3P39876 Gm28836-201ENSMUST00000185842 633 ntTSL 2 BASIC9.15□□□□□ -0.94
Timp3P39876 Gm28388-201ENSMUST00000186262 437 ntBASIC9.15□□□□□ -0.94
Timp3P39876 Gm37284-201ENSMUST00000193607 539 ntBASIC9.15□□□□□ -0.94
Timp3P39876 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC9.15□□□□□ -0.94
Timp3P39876 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC9.15□□□□□ -0.94
Timp3P39876 Gm19091-201ENSMUST00000208120 978 ntBASIC9.15□□□□□ -0.94
Timp3P39876 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC9.15□□□□□ -0.94
Timp3P39876 Gm45594-201ENSMUST00000211717 241 ntBASIC9.15□□□□□ -0.94
Timp3P39876 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC9.15□□□□□ -0.94
Timp3P39876 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC9.15□□□□□ -0.94
Timp3P39876 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC9.15□□□□□ -0.94
Timp3P39876 CT010486.3-201ENSMUST00000224555 811 ntBASIC9.15□□□□□ -0.94
Timp3P39876 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Timp3P39876 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Timp3P39876 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Timp3P39876 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Timp3P39876 AC122018.1-201ENSMUST00000217769 1686 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Timp3P39876 Hars2-206ENSMUST00000152954 3336 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Timp3P39876 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC9.15□□□□□ -0.94
Timp3P39876 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC9.15□□□□□ -0.94
Timp3P39876 Gm3836-201ENSMUST00000211377 1613 ntBASIC9.15□□□□□ -0.94
Timp3P39876 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Timp3P39876 Rasal1-201ENSMUST00000031606 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Timp3P39876 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC9.15□□□□□ -0.94
Timp3P39876 Poldip3-202ENSMUST00000100375 3157 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Timp3P39876 Gm44745-201ENSMUST00000206563 2723 ntBASIC9.15□□□□□ -0.95
Timp3P39876 Chrnb2-203ENSMUST00000200558 3482 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Timp3P39876 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Timp3P39876 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Timp3P39876 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
Timp3P39876 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Timp3P39876 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC9.15□□□□□ -0.95
Timp3P39876 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
Timp3P39876 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Timp3P39876 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Timp3P39876 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Timp3P39876 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Timp3P39876 Gm18642-201ENSMUST00000206642 1400 ntBASIC9.14□□□□□ -0.95
Timp3P39876 Ets2-201ENSMUST00000023612 3890 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Timp3P39876 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Timp3P39876 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Timp3P39876 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Timp3P39876 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Timp3P39876 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Timp3P39876 Cox15-201ENSMUST00000045562 4798 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Timp3P39876 Nxpe5-204ENSMUST00000161047 2379 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Timp3P39876 Gm21358-201ENSMUST00000191645 1659 ntBASIC9.14□□□□□ -0.95
Timp3P39876 Vps9d1-202ENSMUST00000118279 2696 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Timp3P39876 Ntrk3-205ENSMUST00000193002 2678 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms