Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sftpa1P35242 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sftpa1P35242 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sftpa1P35242 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Sftpa1P35242 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sftpa1P35242 Spr-ps1-203ENSMUST00000187705 2892 ntBASIC10.29□□□□□ -0.76
Sftpa1P35242 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sftpa1P35242 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sftpa1P35242 Mrc2-201ENSMUST00000021038 3335 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sftpa1P35242 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sftpa1P35242 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Sftpa1P35242 Misp-202ENSMUST00000169041 2497 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sftpa1P35242 Cacna1c-205ENSMUST00000112825 7577 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sftpa1P35242 Cfb-202ENSMUST00000128767 2751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sftpa1P35242 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sftpa1P35242 Teddm3-201ENSMUST00000170665 1346 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Sftpa1P35242 Gm17836-201ENSMUST00000191976 1302 ntBASIC10.29□□□□□ -0.76
Sftpa1P35242 Hdac6-201ENSMUST00000033501 4142 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Sftpa1P35242 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sftpa1P35242 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Sftpa1P35242 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sftpa1P35242 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.29□□□□□ -0.76
Sftpa1P35242 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Sftpa1P35242 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sftpa1P35242 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sftpa1P35242 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Sftpa1P35242 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sftpa1P35242 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sftpa1P35242 CT025624.1-201ENSMUST00000224007 2700 ntBASIC10.28□□□□□ -0.76
Sftpa1P35242 Gatb-203ENSMUST00000107674 1980 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sftpa1P35242 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sftpa1P35242 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sftpa1P35242 Gm14005-209ENSMUST00000224993 1832 ntBASIC10.28□□□□□ -0.76
Sftpa1P35242 Ambra1-203ENSMUST00000099712 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sftpa1P35242 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sftpa1P35242 Gpld1-201ENSMUST00000021773 5224 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Sftpa1P35242 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC10.28□□□□□ -0.76
Sftpa1P35242 Lgals3bp-201ENSMUST00000043722 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sftpa1P35242 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC10.28□□□□□ -0.76
Sftpa1P35242 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sftpa1P35242 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sftpa1P35242 Pcdh10-202ENSMUST00000170695 8234 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sftpa1P35242 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sftpa1P35242 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC10.28□□□□□ -0.76
Sftpa1P35242 Gm22495-201ENSMUST00000104492 126 ntBASIC10.28□□□□□ -0.76
Sftpa1P35242 Nup188-202ENSMUST00000113634 534 ntTSL 2 BASIC10.28□□□□□ -0.76
Sftpa1P35242 Cdk1-202ENSMUST00000119827 1253 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Sftpa1P35242 Gm15815-201ENSMUST00000120569 255 ntBASIC10.28□□□□□ -0.76
Sftpa1P35242 Gm15287-201ENSMUST00000132564 751 ntTSL 2 BASIC10.28□□□□□ -0.76
Sftpa1P35242 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sftpa1P35242 Gm24294-201ENSMUST00000158295 277 ntBASIC10.28□□□□□ -0.76
Sftpa1P35242 4930524O07Rik-202ENSMUST00000162334 293 ntTSL 2 BASIC10.28□□□□□ -0.76
Sftpa1P35242 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sftpa1P35242 Pax5-212ENSMUST00000173733 885 ntTSL 5 BASIC10.28□□□□□ -0.76
Sftpa1P35242 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Sftpa1P35242 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sftpa1P35242 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sftpa1P35242 4930402C01Rik-201ENSMUST00000192586 663 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sftpa1P35242 Gm6794-201ENSMUST00000203829 457 ntBASIC10.28□□□□□ -0.76
Sftpa1P35242 4933430L12Rik-201ENSMUST00000206788 1194 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sftpa1P35242 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC10.28□□□□□ -0.76
Sftpa1P35242 AC164429.1-201ENSMUST00000224210 518 ntBASIC10.28□□□□□ -0.76
Sftpa1P35242 AC187103.3-201ENSMUST00000225725 646 ntBASIC10.28□□□□□ -0.76
Sftpa1P35242 CT025618.1-203ENSMUST00000227008 589 ntBASIC10.28□□□□□ -0.76
Sftpa1P35242 Olfr700-201ENSMUST00000079936 951 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Sftpa1P35242 Adgrl3-201ENSMUST00000036068 6203 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Sftpa1P35242 Adgrl3-202ENSMUST00000072521 6203 ntAPPRIS P3 TSL 5 BASIC10.28□□□□□ -0.76
Sftpa1P35242 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sftpa1P35242 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sftpa1P35242 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Sftpa1P35242 Vcp-rs-201ENSMUST00000120233 2406 ntBASIC10.28□□□□□ -0.76
Sftpa1P35242 Trf-203ENSMUST00000112645 2339 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sftpa1P35242 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sftpa1P35242 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sftpa1P35242 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sftpa1P35242 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sftpa1P35242 Tapbp-201ENSMUST00000025161 2894 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Sftpa1P35242 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Sftpa1P35242 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Sftpa1P35242 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
Sftpa1P35242 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.76
Sftpa1P35242 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Sftpa1P35242 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC10.27□□□□□ -0.76
Sftpa1P35242 Erich3-203ENSMUST00000189969 3460 ntBASIC10.27□□□□□ -0.76
Sftpa1P35242 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Sftpa1P35242 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Sftpa1P35242 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.27□□□□□ -0.77
Sftpa1P35242 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Sftpa1P35242 Satb1-208ENSMUST00000144331 6243 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sftpa1P35242 Smco1-201ENSMUST00000093183 1408 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Sftpa1P35242 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sftpa1P35242 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.27□□□□□ -0.77
Sftpa1P35242 Gm7168-201ENSMUST00000088809 1603 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sftpa1P35242 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sftpa1P35242 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Sftpa1P35242 Gm16209-201ENSMUST00000118457 627 ntBASIC10.27□□□□□ -0.77
Sftpa1P35242 Gm10171-201ENSMUST00000126220 628 ntBASIC10.27□□□□□ -0.77
Sftpa1P35242 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Sftpa1P35242 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Sftpa1P35242 Gm4943-201ENSMUST00000132879 424 ntBASIC10.27□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms