Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vcam1P29533 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vcam1P29533 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vcam1P29533 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC12.72□□□□□ -0.37
Vcam1P29533 Pmp22-201ENSMUST00000018361 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vcam1P29533 Gm38192-201ENSMUST00000194364 1847 ntBASIC12.72□□□□□ -0.37
Vcam1P29533 Foxred1-202ENSMUST00000127996 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vcam1P29533 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Vcam1P29533 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vcam1P29533 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.72□□□□□ -0.37
Vcam1P29533 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vcam1P29533 Dmrtc1b-201ENSMUST00000101324 1200 ntAPPRIS P3 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vcam1P29533 Dmrtc1b-202ENSMUST00000113609 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vcam1P29533 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC12.72□□□□□ -0.37
Vcam1P29533 Mir432-201ENSMUST00000157230 75 ntBASIC12.72□□□□□ -0.37
Vcam1P29533 Gm5244-201ENSMUST00000164001 339 ntBASIC12.72□□□□□ -0.37
Vcam1P29533 Olfr527-201ENSMUST00000172230 978 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Vcam1P29533 1700084F23Rik-202ENSMUST00000188461 747 ntTSL 3 BASIC12.72□□□□□ -0.37
Vcam1P29533 Gm18001-201ENSMUST00000212023 688 ntBASIC12.72□□□□□ -0.37
Vcam1P29533 AC154461.3-201ENSMUST00000224831 573 ntBASIC12.72□□□□□ -0.37
Vcam1P29533 AC174797.2-201ENSMUST00000225835 165 ntBASIC12.72□□□□□ -0.37
Vcam1P29533 Rab29-201ENSMUST00000027693 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vcam1P29533 Mrpl33-201ENSMUST00000031024 478 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vcam1P29533 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vcam1P29533 Tbp-203ENSMUST00000118001 1652 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vcam1P29533 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vcam1P29533 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vcam1P29533 Ces2h-201ENSMUST00000172032 2445 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Vcam1P29533 Bcl2-202ENSMUST00000189999 2841 ntBASIC12.72□□□□□ -0.37
Vcam1P29533 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Vcam1P29533 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Vcam1P29533 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vcam1P29533 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Vcam1P29533 Tekt2-202ENSMUST00000102616 1542 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Vcam1P29533 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Vcam1P29533 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vcam1P29533 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vcam1P29533 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Vcam1P29533 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vcam1P29533 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vcam1P29533 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.71□□□□□ -0.37
Vcam1P29533 Prss23os-202ENSMUST00000179361 1362 ntBASIC12.71□□□□□ -0.37
Vcam1P29533 E2f7-201ENSMUST00000073781 5473 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vcam1P29533 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vcam1P29533 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vcam1P29533 Rasal2-204ENSMUST00000132699 4013 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Vcam1P29533 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Vcam1P29533 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vcam1P29533 Camk2a-204ENSMUST00000115295 979 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vcam1P29533 Gm11919-201ENSMUST00000117609 721 ntBASIC12.71□□□□□ -0.37
Vcam1P29533 Gm8876-201ENSMUST00000120768 1122 ntBASIC12.71□□□□□ -0.37
Vcam1P29533 7330404K18Rik-201ENSMUST00000125558 487 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vcam1P29533 Gm13008-201ENSMUST00000142289 507 ntTSL 5 BASIC12.71□□□□□ -0.37
Vcam1P29533 Gm37988-201ENSMUST00000155020 825 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Vcam1P29533 Mocs2-201ENSMUST00000015680 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vcam1P29533 Gm25872-201ENSMUST00000177784 100 ntBASIC12.71□□□□□ -0.37
Vcam1P29533 Gm7047-201ENSMUST00000196224 1063 ntBASIC12.71□□□□□ -0.37
Vcam1P29533 AC116680.1-201ENSMUST00000222804 613 ntTSL 3 BASIC12.71□□□□□ -0.37
Vcam1P29533 Ppm1a-205ENSMUST00000222896 1103 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vcam1P29533 AC138716.2-201ENSMUST00000226670 1016 ntBASIC12.71□□□□□ -0.37
Vcam1P29533 Psmb7-201ENSMUST00000028083 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vcam1P29533 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vcam1P29533 Spink2-201ENSMUST00000065216 631 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vcam1P29533 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Vcam1P29533 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Vcam1P29533 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Vcam1P29533 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vcam1P29533 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC12.71□□□□□ -0.38
Vcam1P29533 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vcam1P29533 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Vcam1P29533 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.38
Vcam1P29533 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vcam1P29533 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
Vcam1P29533 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Vcam1P29533 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Vcam1P29533 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Vcam1P29533 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vcam1P29533 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vcam1P29533 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Vcam1P29533 Snx29-201ENSMUST00000096273 1622 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Vcam1P29533 Nrd1-203ENSMUST00000106644 3784 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Vcam1P29533 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.7□□□□□ -0.38
Vcam1P29533 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vcam1P29533 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vcam1P29533 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vcam1P29533 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vcam1P29533 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vcam1P29533 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Vcam1P29533 Smim8-204ENSMUST00000108133 935 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Vcam1P29533 Mir1249-201ENSMUST00000116791 98 ntBASIC12.7□□□□□ -0.38
Vcam1P29533 Gm15625-201ENSMUST00000117617 1093 ntBASIC12.7□□□□□ -0.38
Vcam1P29533 Gm14052-201ENSMUST00000121434 1031 ntBASIC12.7□□□□□ -0.38
Vcam1P29533 Gm15982-201ENSMUST00000121681 554 ntBASIC12.7□□□□□ -0.38
Vcam1P29533 Gm25288-201ENSMUST00000122800 265 ntBASIC12.7□□□□□ -0.38
Vcam1P29533 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Vcam1P29533 Gm13412-201ENSMUST00000150621 677 ntTSL 3 BASIC12.7□□□□□ -0.38
Vcam1P29533 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC12.7□□□□□ -0.38
Vcam1P29533 Krtcap2-204ENSMUST00000168900 582 ntTSL 3 BASIC12.7□□□□□ -0.38
Vcam1P29533 Gm25998-201ENSMUST00000175397 53 ntBASIC12.7□□□□□ -0.38
Vcam1P29533 Gm28671-201ENSMUST00000187036 692 ntBASIC12.7□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms