Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Hcn1-201ENSMUST00000006991 14141 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Pphln1-201ENSMUST00000049122 4023 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Gm43972-201ENSMUST00000181398 1467 ntBASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Gm14892-201ENSMUST00000117636 267 ntBASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Gm14665-201ENSMUST00000122294 557 ntBASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Gm20854-201ENSMUST00000178889 1002 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Gm28388-201ENSMUST00000186262 437 ntBASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Gm37590-201ENSMUST00000193294 603 ntTSL 5 BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Gm29747-201ENSMUST00000194764 585 ntBASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Gm38170-201ENSMUST00000195404 816 ntBASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Psenen-203ENSMUST00000207747 669 ntAPPRIS P1 TSL 2 BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Gm44551-201ENSMUST00000208804 171 ntBASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Gm15802-202ENSMUST00000209595 1094 ntTSL 5 BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Sdf2-201ENSMUST00000002133 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 D9Wsu149-201ENSMUST00000214169 594 ntBASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Gm29787-201ENSMUST00000222129 849 ntBASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 AC129597.1-201ENSMUST00000223046 1234 ntBASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 CT009527.1-201ENSMUST00000224205 339 ntBASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.32□□□□□ -0.76
Tnfrsf1bP25119 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf1bP25119 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf1bP25119 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf1bP25119 Tmbim1-202ENSMUST00000113796 11011 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf1bP25119 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC10.31□□□□□ -0.76
Tnfrsf1bP25119 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf1bP25119 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Tnfrsf1bP25119 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf1bP25119 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf1bP25119 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf1bP25119 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf1bP25119 Gtf3c2-201ENSMUST00000088010 4552 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf1bP25119 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf1bP25119 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf1bP25119 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC10.31□□□□□ -0.76
Tnfrsf1bP25119 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Tnfrsf1bP25119 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf1bP25119 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf1bP25119 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Tnfrsf1bP25119 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC10.31□□□□□ -0.76
Tnfrsf1bP25119 Ctrc-202ENSMUST00000105781 784 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf1bP25119 Cd27-203ENSMUST00000112282 588 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf1bP25119 Acrbp-204ENSMUST00000112413 672 ntTSL 2 BASIC10.31□□□□□ -0.76
Tnfrsf1bP25119 Gm14579-201ENSMUST00000117068 283 ntBASIC10.31□□□□□ -0.76
Tnfrsf1bP25119 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC10.31□□□□□ -0.76
Tnfrsf1bP25119 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC10.31□□□□□ -0.76
Tnfrsf1bP25119 Rpa3-201ENSMUST00000012627 670 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf1bP25119 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf1bP25119 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC10.31□□□□□ -0.76
Tnfrsf1bP25119 Gm6407-201ENSMUST00000176468 549 ntBASIC10.31□□□□□ -0.76
Tnfrsf1bP25119 Gm19015-201ENSMUST00000184002 1189 ntBASIC10.31□□□□□ -0.76
Tnfrsf1bP25119 Gm8531-201ENSMUST00000188319 893 ntBASIC10.31□□□□□ -0.76
Tnfrsf1bP25119 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf1bP25119 Gm43695-201ENSMUST00000196545 196 ntTSL 1 (best) BASIC10.31□□□□□ -0.76
Tnfrsf1bP25119 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC10.31□□□□□ -0.76
Tnfrsf1bP25119 Gm43380-201ENSMUST00000200421 220 ntBASIC10.31□□□□□ -0.76
Tnfrsf1bP25119 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC10.31□□□□□ -0.76
Tnfrsf1bP25119 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC10.31□□□□□ -0.76
Tnfrsf1bP25119 AC154252.1-201ENSMUST00000226041 473 ntBASIC10.31□□□□□ -0.76
Tnfrsf1bP25119 AC136376.2-201ENSMUST00000228819 490 ntBASIC10.31□□□□□ -0.76
Tnfrsf1bP25119 Fth1-201ENSMUST00000025563 866 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms