Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC8.98□□□□□ -0.97
Hoxd3P09027 Gm10807-201ENSMUST00000177134 795 ntBASIC8.98□□□□□ -0.97
Hoxd3P09027 Gm21092-201ENSMUST00000178995 955 ntBASIC8.98□□□□□ -0.97
Hoxd3P09027 Gm26723-201ENSMUST00000180771 787 ntTSL 5 BASIC8.98□□□□□ -0.97
Hoxd3P09027 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC8.98□□□□□ -0.97
Hoxd3P09027 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC8.98□□□□□ -0.97
Hoxd3P09027 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC8.98□□□□□ -0.97
Hoxd3P09027 Gm33050-201ENSMUST00000198132 501 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Hoxd3P09027 Gm18290-201ENSMUST00000202900 844 ntBASIC8.98□□□□□ -0.97
Hoxd3P09027 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC8.98□□□□□ -0.97
Hoxd3P09027 Gm9463-201ENSMUST00000206707 601 ntBASIC8.98□□□□□ -0.97
Hoxd3P09027 Gm44837-201ENSMUST00000206863 717 ntBASIC8.98□□□□□ -0.97
Hoxd3P09027 CT485607.1-201ENSMUST00000216100 85 ntBASIC8.98□□□□□ -0.97
Hoxd3P09027 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC8.98□□□□□ -0.97
Hoxd3P09027 AC160030.1-201ENSMUST00000218916 506 ntTSL 2 BASIC8.98□□□□□ -0.97
Hoxd3P09027 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC8.98□□□□□ -0.97
Hoxd3P09027 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC8.98□□□□□ -0.97
Hoxd3P09027 6030440G07Rik-201ENSMUST00000221849 1090 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Hoxd3P09027 Gm8607-201ENSMUST00000221864 431 ntBASIC8.98□□□□□ -0.97
Hoxd3P09027 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC8.98□□□□□ -0.97
Hoxd3P09027 AC131117.1-201ENSMUST00000225154 1171 ntBASIC8.98□□□□□ -0.97
Hoxd3P09027 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Hoxd3P09027 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Hoxd3P09027 Olfr898-201ENSMUST00000076504 951 ntAPPRIS P2 BASIC8.98□□□□□ -0.97
Hoxd3P09027 Olfr196-201ENSMUST00000077027 930 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Hoxd3P09027 H3f3a-201ENSMUST00000081026 888 ntAPPRIS ALT1 TSL 5 BASIC8.98□□□□□ -0.97
Hoxd3P09027 Gm5879-201ENSMUST00000089501 1209 ntBASIC8.98□□□□□ -0.97
Hoxd3P09027 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Hoxd3P09027 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Hoxd3P09027 AC093022.4-203ENSMUST00000228523 2657 ntBASIC8.98□□□□□ -0.97
Hoxd3P09027 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC8.98□□□□□ -0.97
Hoxd3P09027 Fetub-204ENSMUST00000170805 1508 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Hoxd3P09027 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Hoxd3P09027 Gm44831-201ENSMUST00000208469 2989 ntBASIC8.98□□□□□ -0.97
Hoxd3P09027 Cdh22-201ENSMUST00000065438 3702 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Hoxd3P09027 Cep19-203ENSMUST00000169186 1320 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
Hoxd3P09027 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC8.98□□□□□ -0.97
Hoxd3P09027 Fosb-203ENSMUST00000207716 3546 ntTSL 5 BASIC8.98□□□□□ -0.97
Hoxd3P09027 AC107453.4-201ENSMUST00000227068 1817 ntBASIC8.98□□□□□ -0.97
Hoxd3P09027 Angpt4-201ENSMUST00000028955 2335 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Hoxd3P09027 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC8.98□□□□□ -0.97
Hoxd3P09027 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Hoxd3P09027 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Hoxd3P09027 Tsku-202ENSMUST00000164726 2620 ntAPPRIS P1 TSL 2 BASIC8.98□□□□□ -0.97
Hoxd3P09027 Gm19967-201ENSMUST00000179676 2138 ntTSL 5 BASIC8.98□□□□□ -0.97
Hoxd3P09027 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
Hoxd3P09027 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC8.98□□□□□ -0.97
Hoxd3P09027 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
Hoxd3P09027 Gm43174-201ENSMUST00000195914 2445 ntBASIC8.97□□□□□ -0.97
Hoxd3P09027 Asic5-201ENSMUST00000029641 1657 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Hoxd3P09027 Acnat2-201ENSMUST00000081541 1664 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Hoxd3P09027 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC8.97□□□□□ -0.97
Hoxd3P09027 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Hoxd3P09027 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Hoxd3P09027 Arg1-201ENSMUST00000020161 1477 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Hoxd3P09027 AC130831.1-201ENSMUST00000224546 1474 ntBASIC8.97□□□□□ -0.97
Hoxd3P09027 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Hoxd3P09027 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC8.97□□□□□ -0.97
Hoxd3P09027 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Hoxd3P09027 Megf8-201ENSMUST00000128119 10040 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Hoxd3P09027 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Hoxd3P09027 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Hoxd3P09027 Lamb3-209ENSMUST00000194677 4867 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Hoxd3P09027 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC8.97□□□□□ -0.97
Hoxd3P09027 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Hoxd3P09027 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC8.97□□□□□ -0.97
Hoxd3P09027 Gm11667-201ENSMUST00000119828 486 ntBASIC8.97□□□□□ -0.97
Hoxd3P09027 Gm11960-201ENSMUST00000122068 925 ntBASIC8.97□□□□□ -0.97
Hoxd3P09027 Gm14665-201ENSMUST00000122294 557 ntBASIC8.97□□□□□ -0.97
Hoxd3P09027 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC8.97□□□□□ -0.97
Hoxd3P09027 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Hoxd3P09027 Dnmt3bos-201ENSMUST00000124988 718 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Hoxd3P09027 Gm14199-201ENSMUST00000130021 495 ntTSL 2 BASIC8.97□□□□□ -0.97
Hoxd3P09027 Gm13073-201ENSMUST00000134059 486 ntTSL 3 BASIC8.97□□□□□ -0.97
Hoxd3P09027 Gm16284-201ENSMUST00000140995 400 ntBASIC8.97□□□□□ -0.97
Hoxd3P09027 Gm11290-203ENSMUST00000147811 314 ntTSL 5 BASIC8.97□□□□□ -0.97
Hoxd3P09027 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Hoxd3P09027 Gm22730-201ENSMUST00000158085 171 ntBASIC8.97□□□□□ -0.97
Hoxd3P09027 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC8.97□□□□□ -0.97
Hoxd3P09027 Gm8459-201ENSMUST00000162504 760 ntBASIC8.97□□□□□ -0.97
Hoxd3P09027 Vmn1r18-201ENSMUST00000164732 1087 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
Hoxd3P09027 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC8.97□□□□□ -0.97
Hoxd3P09027 Esp16-201ENSMUST00000178037 1243 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Hoxd3P09027 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Hoxd3P09027 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
Hoxd3P09027 Gm29088-201ENSMUST00000189363 581 ntTSL 3 BASIC8.97□□□□□ -0.97
Hoxd3P09027 Gm38177-201ENSMUST00000192213 1040 ntBASIC8.97□□□□□ -0.97
Hoxd3P09027 Gm19231-201ENSMUST00000193212 830 ntBASIC8.97□□□□□ -0.97
Hoxd3P09027 Gm9645-201ENSMUST00000197131 792 ntBASIC8.97□□□□□ -0.97
Hoxd3P09027 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC8.97□□□□□ -0.97
Hoxd3P09027 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Hoxd3P09027 Gm44545-201ENSMUST00000208262 746 ntBASIC8.97□□□□□ -0.97
Hoxd3P09027 CT485606.1-201ENSMUST00000213187 878 ntBASIC8.97□□□□□ -0.97
Hoxd3P09027 Gm19174-201ENSMUST00000216944 956 ntBASIC8.97□□□□□ -0.97
Hoxd3P09027 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
Hoxd3P09027 AC166344.1-201ENSMUST00000223745 674 ntBASIC8.97□□□□□ -0.97
Hoxd3P09027 AC129219.2-201ENSMUST00000224324 701 ntBASIC8.97□□□□□ -0.97
Hoxd3P09027 AC154257.1-202ENSMUST00000224729 843 ntBASIC8.97□□□□□ -0.97
Hoxd3P09027 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
Hoxd3P09027 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms