Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Olfr171-202ENSMUST00000205467 1406 ntAPPRIS ALT1 TSL 2 BASIC13.44□□□□□ -0.26
NpcdF8VQB8 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
NpcdF8VQB8 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC13.44□□□□□ -0.26
NpcdF8VQB8 Pdzrn4-202ENSMUST00000169942 3851 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NpcdF8VQB8 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
NpcdF8VQB8 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
NpcdF8VQB8 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
NpcdF8VQB8 Eif2s1-201ENSMUST00000071230 3405 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NpcdF8VQB8 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
NpcdF8VQB8 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NpcdF8VQB8 Zfp810-201ENSMUST00000086278 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NpcdF8VQB8 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NpcdF8VQB8 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
NpcdF8VQB8 Evi5l-208ENSMUST00000176825 3728 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
NpcdF8VQB8 Mir1249-201ENSMUST00000116791 98 ntBASIC13.43□□□□□ -0.26
NpcdF8VQB8 Gm14716-201ENSMUST00000120138 718 ntBASIC13.43□□□□□ -0.26
NpcdF8VQB8 Fthl17-ps2-201ENSMUST00000122268 528 ntBASIC13.43□□□□□ -0.26
NpcdF8VQB8 Gm16441-201ENSMUST00000138176 924 ntBASIC13.43□□□□□ -0.26
NpcdF8VQB8 Tsc22d1-207ENSMUST00000140251 670 ntTSL 2 BASIC13.43□□□□□ -0.26
NpcdF8VQB8 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
NpcdF8VQB8 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
NpcdF8VQB8 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
NpcdF8VQB8 n-R5s130-201ENSMUST00000178128 119 ntBASIC13.43□□□□□ -0.26
NpcdF8VQB8 Gm24312-201ENSMUST00000178677 119 ntBASIC13.43□□□□□ -0.26
NpcdF8VQB8 n-R5s106-201ENSMUST00000179060 119 ntBASIC13.43□□□□□ -0.26
NpcdF8VQB8 n-R5s118-201ENSMUST00000179887 119 ntBASIC13.43□□□□□ -0.26
NpcdF8VQB8 Ccna1-204ENSMUST00000198320 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NpcdF8VQB8 Gm43102-201ENSMUST00000201004 2324 ntBASIC13.43□□□□□ -0.26
NpcdF8VQB8 Gm5650-201ENSMUST00000209641 598 ntBASIC13.43□□□□□ -0.26
NpcdF8VQB8 Cenpx-201ENSMUST00000026137 692 ntTSL 2 BASIC13.43□□□□□ -0.26
NpcdF8VQB8 Ngp-201ENSMUST00000035061 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NpcdF8VQB8 Neurod6-201ENSMUST00000044767 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NpcdF8VQB8 Olfr115-201ENSMUST00000076936 939 ntAPPRIS P2 BASIC13.43□□□□□ -0.26
NpcdF8VQB8 Scn8a-208ENSMUST00000200963 5814 ntTSL 5 BASIC13.43□□□□□ -0.26
NpcdF8VQB8 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC13.43□□□□□ -0.26
NpcdF8VQB8 Gm18983-201ENSMUST00000222884 2729 ntBASIC13.43□□□□□ -0.26
NpcdF8VQB8 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC13.43□□□□□ -0.26
NpcdF8VQB8 Kcnk2-206ENSMUST00000193319 1548 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
NpcdF8VQB8 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
NpcdF8VQB8 Gm42498-201ENSMUST00000199981 1372 ntBASIC13.43□□□□□ -0.26
NpcdF8VQB8 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC13.43□□□□□ -0.26
NpcdF8VQB8 Dmbt1-201ENSMUST00000084509 6243 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
NpcdF8VQB8 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
NpcdF8VQB8 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
NpcdF8VQB8 Cdc20b-203ENSMUST00000181117 1608 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
NpcdF8VQB8 Gm20757-201ENSMUST00000182870 1604 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NpcdF8VQB8 Dis3l-208ENSMUST00000168844 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NpcdF8VQB8 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NpcdF8VQB8 Fyb2-201ENSMUST00000106803 3136 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NpcdF8VQB8 Maged2-202ENSMUST00000112697 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NpcdF8VQB8 Slc38a5-201ENSMUST00000033512 1868 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NpcdF8VQB8 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NpcdF8VQB8 Tpra1-218ENSMUST00000203185 1718 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
NpcdF8VQB8 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
NpcdF8VQB8 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NpcdF8VQB8 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NpcdF8VQB8 Kifap3-202ENSMUST00000077642 4012 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NpcdF8VQB8 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
NpcdF8VQB8 Slc39a14-202ENSMUST00000068044 4926 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
NpcdF8VQB8 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NpcdF8VQB8 Upp1-202ENSMUST00000101525 1157 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NpcdF8VQB8 Ighv5-15-201ENSMUST00000103457 350 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
NpcdF8VQB8 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NpcdF8VQB8 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NpcdF8VQB8 Gm11952-201ENSMUST00000121172 821 ntBASIC13.42□□□□□ -0.26
NpcdF8VQB8 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC13.42□□□□□ -0.26
NpcdF8VQB8 Gm4705-201ENSMUST00000177415 354 ntBASIC13.42□□□□□ -0.26
NpcdF8VQB8 Gm5210-201ENSMUST00000182150 1010 ntBASIC13.42□□□□□ -0.26
NpcdF8VQB8 Gm27316-201ENSMUST00000184884 277 ntBASIC13.42□□□□□ -0.26
NpcdF8VQB8 Gm28826-201ENSMUST00000190006 488 ntTSL 2 BASIC13.42□□□□□ -0.26
NpcdF8VQB8 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC13.42□□□□□ -0.26
NpcdF8VQB8 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NpcdF8VQB8 Gm44640-201ENSMUST00000206894 247 ntBASIC13.42□□□□□ -0.26
NpcdF8VQB8 Gm18256-201ENSMUST00000209087 907 ntBASIC13.42□□□□□ -0.26
NpcdF8VQB8 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NpcdF8VQB8 AC140314.1-201ENSMUST00000219549 554 ntBASIC13.42□□□□□ -0.26
NpcdF8VQB8 AC122840.4-201ENSMUST00000221310 1285 ntTSL 5 BASIC13.42□□□□□ -0.26
NpcdF8VQB8 AC154433.1-201ENSMUST00000224401 1183 ntBASIC13.42□□□□□ -0.26
NpcdF8VQB8 Fthl17a-201ENSMUST00000048382 835 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NpcdF8VQB8 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
NpcdF8VQB8 Iah1-201ENSMUST00000076813 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NpcdF8VQB8 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NpcdF8VQB8 Pdxk-201ENSMUST00000041616 5124 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NpcdF8VQB8 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NpcdF8VQB8 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NpcdF8VQB8 Terb1-201ENSMUST00000064576 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NpcdF8VQB8 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC13.42□□□□□ -0.26
NpcdF8VQB8 Nxph1-202ENSMUST00000160300 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NpcdF8VQB8 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC13.42□□□□□ -0.26
NpcdF8VQB8 Asap3-201ENSMUST00000047526 4225 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NpcdF8VQB8 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NpcdF8VQB8 Steap3-202ENSMUST00000112640 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NpcdF8VQB8 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
NpcdF8VQB8 Ubap2l-201ENSMUST00000029553 3509 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
NpcdF8VQB8 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
NpcdF8VQB8 Slc24a5-201ENSMUST00000070353 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NpcdF8VQB8 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
NpcdF8VQB8 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
NpcdF8VQB8 Zcchc11-202ENSMUST00000097925 5865 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
NpcdF8VQB8 Gm39204-201ENSMUST00000210045 1307 ntTSL 5 BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms