Protein–RNA interactions for Protein: F6SEU4

Syngap1, Ras/Rap GTPase-activating protein SynGAP, mousemouse

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syngap1F6SEU4 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Syngap1F6SEU4 Gm9415-201ENSMUST00000200462 1321 ntBASIC12.56□□□□□ -0.4
Syngap1F6SEU4 Gm45677-201ENSMUST00000209975 1341 ntBASIC12.56□□□□□ -0.4
Syngap1F6SEU4 Siglech-206ENSMUST00000171077 1934 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Syngap1F6SEU4 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Syngap1F6SEU4 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syngap1F6SEU4 Trpc6-201ENSMUST00000050433 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syngap1F6SEU4 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Syngap1F6SEU4 Ifnar1-201ENSMUST00000023689 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syngap1F6SEU4 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC12.55□□□□□ -0.4
Syngap1F6SEU4 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syngap1F6SEU4 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syngap1F6SEU4 Aldh4a1-201ENSMUST00000039818 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syngap1F6SEU4 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC12.55□□□□□ -0.4
Syngap1F6SEU4 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syngap1F6SEU4 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syngap1F6SEU4 Acoxl-201ENSMUST00000028859 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syngap1F6SEU4 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syngap1F6SEU4 Spert-203ENSMUST00000165569 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syngap1F6SEU4 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Syngap1F6SEU4 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syngap1F6SEU4 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Syngap1F6SEU4 Mtmr12-202ENSMUST00000071993 3351 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Syngap1F6SEU4 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Syngap1F6SEU4 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Syngap1F6SEU4 Gm8019-201ENSMUST00000119317 587 ntBASIC12.55□□□□□ -0.4
Syngap1F6SEU4 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Syngap1F6SEU4 Gm16030-201ENSMUST00000159098 603 ntBASIC12.55□□□□□ -0.4
Syngap1F6SEU4 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC12.55□□□□□ -0.4
Syngap1F6SEU4 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Syngap1F6SEU4 Gm4895-201ENSMUST00000181646 1137 ntBASIC12.55□□□□□ -0.4
Syngap1F6SEU4 Gm43811-201ENSMUST00000202862 695 ntBASIC12.55□□□□□ -0.4
Syngap1F6SEU4 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Syngap1F6SEU4 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Syngap1F6SEU4 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC12.55□□□□□ -0.4
Syngap1F6SEU4 4631405J19Rik-201ENSMUST00000099699 1225 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Syngap1F6SEU4 Slc35a4-202ENSMUST00000050476 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syngap1F6SEU4 Gdap2-202ENSMUST00000106997 2014 ntTSL 2 BASIC12.55□□□□□ -0.4
Syngap1F6SEU4 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Syngap1F6SEU4 Gnb1l-204ENSMUST00000115601 3507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syngap1F6SEU4 Gnb1l-202ENSMUST00000090086 3549 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syngap1F6SEU4 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syngap1F6SEU4 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Syngap1F6SEU4 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Syngap1F6SEU4 Rspry1-201ENSMUST00000060389 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Syngap1F6SEU4 Immt-202ENSMUST00000101301 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Syngap1F6SEU4 F10-201ENSMUST00000033821 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Syngap1F6SEU4 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Syngap1F6SEU4 Slc7a4-207ENSMUST00000172164 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Syngap1F6SEU4 Rps6kb1-202ENSMUST00000058286 3250 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Syngap1F6SEU4 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Syngap1F6SEU4 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Syngap1F6SEU4 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Syngap1F6SEU4 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Syngap1F6SEU4 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Syngap1F6SEU4 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Syngap1F6SEU4 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Syngap1F6SEU4 S100a4-201ENSMUST00000001046 498 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Syngap1F6SEU4 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC12.54□□□□□ -0.4
Syngap1F6SEU4 Tnnt3-211ENSMUST00000105949 955 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Syngap1F6SEU4 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC12.54□□□□□ -0.4
Syngap1F6SEU4 Gm12009-201ENSMUST00000121361 1100 ntBASIC12.54□□□□□ -0.4
Syngap1F6SEU4 Gm15982-201ENSMUST00000121681 554 ntBASIC12.54□□□□□ -0.4
Syngap1F6SEU4 Rplp0-ps1-201ENSMUST00000122125 933 ntBASIC12.54□□□□□ -0.4
Syngap1F6SEU4 Gm15911-201ENSMUST00000138992 809 ntTSL 3 BASIC12.54□□□□□ -0.4
Syngap1F6SEU4 Gm25569-201ENSMUST00000157175 131 ntBASIC12.54□□□□□ -0.4
Syngap1F6SEU4 Gm6216-201ENSMUST00000182390 687 ntBASIC12.54□□□□□ -0.4
Syngap1F6SEU4 Gm27168-201ENSMUST00000183394 361 ntTSL 3 BASIC12.54□□□□□ -0.4
Syngap1F6SEU4 Mir6359-201ENSMUST00000183668 81 ntBASIC12.54□□□□□ -0.4
Syngap1F6SEU4 Gm8197-202ENSMUST00000193422 934 ntBASIC12.54□□□□□ -0.4
Syngap1F6SEU4 Gm39091-201ENSMUST00000206189 553 ntTSL 2 BASIC12.54□□□□□ -0.4
Syngap1F6SEU4 AC117769.1-201ENSMUST00000224716 1120 ntBASIC12.54□□□□□ -0.4
Syngap1F6SEU4 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Syngap1F6SEU4 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Syngap1F6SEU4 Cxcr5-202ENSMUST00000179828 2824 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Syngap1F6SEU4 Gm44086-201ENSMUST00000203251 2349 ntBASIC12.54□□□□□ -0.4
Syngap1F6SEU4 Kcne3-202ENSMUST00000170954 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Syngap1F6SEU4 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Syngap1F6SEU4 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Syngap1F6SEU4 Fnip1-201ENSMUST00000046835 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Syngap1F6SEU4 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC12.54□□□□□ -0.4
Syngap1F6SEU4 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC12.54□□□□□ -0.4
Syngap1F6SEU4 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Syngap1F6SEU4 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Syngap1F6SEU4 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Syngap1F6SEU4 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Syngap1F6SEU4 Stra6-202ENSMUST00000085677 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Syngap1F6SEU4 Gm38089-201ENSMUST00000193585 1514 ntBASIC12.53□□□□□ -0.4
Syngap1F6SEU4 Gm37014-201ENSMUST00000194723 2253 ntBASIC12.53□□□□□ -0.4
Syngap1F6SEU4 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Syngap1F6SEU4 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Syngap1F6SEU4 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Syngap1F6SEU4 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Syngap1F6SEU4 Gatb-202ENSMUST00000107672 1820 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Syngap1F6SEU4 Matn2-201ENSMUST00000022947 3551 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Syngap1F6SEU4 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Syngap1F6SEU4 Cenpx-204ENSMUST00000106155 700 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Syngap1F6SEU4 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Syngap1F6SEU4 Gm14227-201ENSMUST00000119431 629 ntBASIC12.53□□□□□ -0.4
Syngap1F6SEU4 Gm11993-201ENSMUST00000121861 820 ntBASIC12.53□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms