Protein–RNA interactions for Protein: W4VSN7

Gm3550, 60S ribosomal protein L29, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3550W4VSN7 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC9.45□□□□□ -0.9
Gm3550W4VSN7 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm3550W4VSN7 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Gm3550W4VSN7 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm3550W4VSN7 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC9.45□□□□□ -0.9
Gm3550W4VSN7 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Gm3550W4VSN7 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm3550W4VSN7 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC9.45□□□□□ -0.9
Gm3550W4VSN7 Abca9-201ENSMUST00000044850 6384 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm3550W4VSN7 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC9.45□□□□□ -0.9
Gm3550W4VSN7 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Gm3550W4VSN7 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC9.45□□□□□ -0.9
Gm3550W4VSN7 Zfp354a-204ENSMUST00000109122 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Gm3550W4VSN7 Gm14005-209ENSMUST00000224993 1832 ntBASIC9.45□□□□□ -0.9
Gm3550W4VSN7 CT009489.1-201ENSMUST00000227740 1893 ntBASIC9.45□□□□□ -0.9
Gm3550W4VSN7 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Tfip11-201ENSMUST00000031288 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Psd-202ENSMUST00000096029 3903 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Maob-201ENSMUST00000040820 2411 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Tas1r2-202ENSMUST00000166773 2524 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Gm3550W4VSN7 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Asap1-202ENSMUST00000110114 4409 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Kcnn3-201ENSMUST00000000811 2884 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm3550W4VSN7 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Nfic-201ENSMUST00000020461 3348 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Nrp2-202ENSMUST00000063594 6342 ntAPPRIS P4 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Rs1-202ENSMUST00000112368 731 ntTSL 3 BASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Gm22711-201ENSMUST00000116890 133 ntBASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Gm4909-201ENSMUST00000118749 794 ntBASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Gm15329-201ENSMUST00000121408 155 ntBASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Gm15549-201ENSMUST00000121595 622 ntBASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Gm37835-201ENSMUST00000193305 361 ntBASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Gm42867-201ENSMUST00000202995 469 ntBASIC9.44□□□□□ -0.9
Gm3550W4VSN7 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Kif3c-201ENSMUST00000020999 6791 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Gm18642-201ENSMUST00000206642 1400 ntBASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Gm5171-201ENSMUST00000214944 1415 ntBASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Gem-202ENSMUST00000108304 2006 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Gm3550W4VSN7 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Synpr-201ENSMUST00000070323 2541 ntAPPRIS P3 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Mab21l2-201ENSMUST00000077524 2703 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Gm3550W4VSN7 Thsd7a-206ENSMUST00000172356 10998 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Ppp1r12a-205ENSMUST00000219263 3355 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Gm13398-201ENSMUST00000149378 2837 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Pisd-203ENSMUST00000120591 2491 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Plxna3-201ENSMUST00000004326 6943 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Aldh3b2-201ENSMUST00000143380 2141 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Sez6l-201ENSMUST00000075387 6055 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Gne-201ENSMUST00000030201 5384 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Gm18198-201ENSMUST00000204986 1551 ntBASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC9.43□□□□□ -0.9
Gm3550W4VSN7 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Gm25732-201ENSMUST00000175168 60 ntBASIC9.43□□□□□ -0.9
Gm3550W4VSN7 Gm10774-201ENSMUST00000188689 204 ntBASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms