Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC10.63□□□□□ -0.71
Ube4bQ9ES00 Gm30285-201ENSMUST00000214614 422 ntBASIC10.63□□□□□ -0.71
Ube4bQ9ES00 Gm19994-201ENSMUST00000217086 586 ntBASIC10.63□□□□□ -0.71
Ube4bQ9ES00 AC132384.14-201ENSMUST00000219346 1147 ntBASIC10.63□□□□□ -0.71
Ube4bQ9ES00 AC166344.1-202ENSMUST00000224139 234 ntBASIC10.63□□□□□ -0.71
Ube4bQ9ES00 AC163667.3-201ENSMUST00000225774 222 ntBASIC10.63□□□□□ -0.71
Ube4bQ9ES00 Fam241b-201ENSMUST00000027719 771 ntTSL 3 BASIC10.63□□□□□ -0.71
Ube4bQ9ES00 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC10.63□□□□□ -0.71
Ube4bQ9ES00 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ube4bQ9ES00 Gm10312-201ENSMUST00000078515 489 ntBASIC10.63□□□□□ -0.71
Ube4bQ9ES00 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ube4bQ9ES00 Gm8399-201ENSMUST00000082300 1117 ntBASIC10.63□□□□□ -0.71
Ube4bQ9ES00 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Ube4bQ9ES00 5430405H02Rik-201ENSMUST00000153616 1431 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Ube4bQ9ES00 Gm9220-201ENSMUST00000190721 2544 ntBASIC10.63□□□□□ -0.71
Ube4bQ9ES00 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
Ube4bQ9ES00 Gys1-206ENSMUST00000211150 2681 ntTSL 5 BASIC10.63□□□□□ -0.71
Ube4bQ9ES00 N4bp2l1-205ENSMUST00000202031 1864 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Ube4bQ9ES00 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ube4bQ9ES00 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
Ube4bQ9ES00 Gm26862-201ENSMUST00000181886 2191 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Ube4bQ9ES00 Pitpnm2os2-203ENSMUST00000198466 2467 ntBASIC10.63□□□□□ -0.71
Ube4bQ9ES00 Atg4b-201ENSMUST00000027502 4173 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ube4bQ9ES00 Ccdc136-207ENSMUST00000154619 3356 ntAPPRIS ALT2 TSL 5 BASIC10.63□□□□□ -0.71
Ube4bQ9ES00 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Ube4bQ9ES00 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC10.63□□□□□ -0.71
Ube4bQ9ES00 Rorc-204ENSMUST00000200009 1543 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Ube4bQ9ES00 Gm32219-201ENSMUST00000221234 1819 ntTSL 5 BASIC10.63□□□□□ -0.71
Ube4bQ9ES00 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ube4bQ9ES00 Exoc7-201ENSMUST00000021147 3337 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Ube4bQ9ES00 Gpr37-201ENSMUST00000054867 4974 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Ube4bQ9ES00 Mical1-203ENSMUST00000119962 3565 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Mical1-201ENSMUST00000019967 3563 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Syncrip-208ENSMUST00000174282 3404 ntAPPRIS ALT1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Gm26809-201ENSMUST00000180863 2981 ntTSL 5 BASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Adgrl3-215ENSMUST00000120673 5178 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Izumo1-201ENSMUST00000033100 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Pde2a-204ENSMUST00000209537 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ube4bQ9ES00 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Dusp16-201ENSMUST00000100857 5104 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Zfat-204ENSMUST00000162054 4386 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Hnrnpk-216ENSMUST00000177019 2626 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Gm43633-201ENSMUST00000202455 2330 ntBASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Gm37451-201ENSMUST00000194718 2167 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Ccdc15-202ENSMUST00000213633 3331 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Gm43274-201ENSMUST00000202545 5000 ntBASIC10.62□□□□□ -0.71
Ube4bQ9ES00 0610037L13Rik-207ENSMUST00000125107 1551 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Casq2-205ENSMUST00000165540 2434 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Gm5419-201ENSMUST00000119301 527 ntBASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Gm15547-201ENSMUST00000122152 333 ntBASIC10.62□□□□□ -0.71
Ube4bQ9ES00 4631405J19Rik-204ENSMUST00000145926 936 ntTSL 3 BASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Gm11379-201ENSMUST00000154678 381 ntTSL 3 BASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Nudt17-202ENSMUST00000171249 1110 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Gm9368-201ENSMUST00000219348 831 ntBASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Gm18065-201ENSMUST00000221395 526 ntBASIC10.62□□□□□ -0.71
Ube4bQ9ES00 AC154252.2-201ENSMUST00000223593 767 ntBASIC10.62□□□□□ -0.71
Ube4bQ9ES00 AC137950.2-201ENSMUST00000227127 1089 ntBASIC10.62□□□□□ -0.71
Ube4bQ9ES00 CT025533.2-201ENSMUST00000228715 1248 ntBASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Pex11b-201ENSMUST00000048766 1122 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Amz2-203ENSMUST00000103061 1832 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Mefv-202ENSMUST00000100222 3249 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Gm10804-201ENSMUST00000099693 2244 ntTSL 2 BASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Ntrk3-206ENSMUST00000195262 2774 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Slf2-201ENSMUST00000096053 6880 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Zbtb8b-201ENSMUST00000053042 3288 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Ablim1-212ENSMUST00000111558 3123 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Lox-202ENSMUST00000171470 4468 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Zfp324-201ENSMUST00000038701 4315 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Nek5-201ENSMUST00000169834 2404 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Slc34a2-201ENSMUST00000094787 4176 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Ube4bQ9ES00 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ube4bQ9ES00 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Ube4bQ9ES00 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ube4bQ9ES00 Fyn-205ENSMUST00000135242 2114 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Ube4bQ9ES00 Glt1d1-201ENSMUST00000118139 3413 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ube4bQ9ES00 Tsc22d3-201ENSMUST00000055738 1974 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ube4bQ9ES00 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.61□□□□□ -0.71
Ube4bQ9ES00 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ube4bQ9ES00 Ywhag-201ENSMUST00000055808 3520 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ube4bQ9ES00 Cd160-203ENSMUST00000165991 2458 ntAPPRIS ALT2 TSL 3 BASIC10.61□□□□□ -0.71
Ube4bQ9ES00 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ube4bQ9ES00 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Ube4bQ9ES00 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC10.61□□□□□ -0.71
Ube4bQ9ES00 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms