Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gtf3c6Q9D8P7 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gtf3c6Q9D8P7 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Gtf3c6Q9D8P7 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Gtf3c6Q9D8P7 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Gtf3c6Q9D8P7 Prph2-201ENSMUST00000024773 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gtf3c6Q9D8P7 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Gtf3c6Q9D8P7 Eno4-202ENSMUST00000200910 2567 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Gtf3c6Q9D8P7 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC12.11□□□□□ -0.47
Gtf3c6Q9D8P7 C130036L24Rik-202ENSMUST00000137643 3109 ntTSL 2 BASIC12.11□□□□□ -0.47
Gtf3c6Q9D8P7 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Gtf3c6Q9D8P7 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gtf3c6Q9D8P7 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gtf3c6Q9D8P7 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gtf3c6Q9D8P7 Cdcp2-201ENSMUST00000062495 2611 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gtf3c6Q9D8P7 Gm6831-202ENSMUST00000213025 1673 ntBASIC12.1□□□□□ -0.47
Gtf3c6Q9D8P7 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gtf3c6Q9D8P7 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gtf3c6Q9D8P7 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Gtf3c6Q9D8P7 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC12.1□□□□□ -0.47
Gtf3c6Q9D8P7 Gm1627-201ENSMUST00000188504 2588 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gtf3c6Q9D8P7 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gtf3c6Q9D8P7 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Gtf3c6Q9D8P7 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Gtf3c6Q9D8P7 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Gtf3c6Q9D8P7 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gtf3c6Q9D8P7 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gtf3c6Q9D8P7 Gm15329-201ENSMUST00000121408 155 ntBASIC12.1□□□□□ -0.47
Gtf3c6Q9D8P7 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gtf3c6Q9D8P7 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC12.1□□□□□ -0.47
Gtf3c6Q9D8P7 Gm17231-203ENSMUST00000170133 637 ntTSL 3 BASIC12.1□□□□□ -0.47
Gtf3c6Q9D8P7 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC12.1□□□□□ -0.47
Gtf3c6Q9D8P7 Gm19208-201ENSMUST00000213861 912 ntBASIC12.1□□□□□ -0.47
Gtf3c6Q9D8P7 Gm2517-201ENSMUST00000215651 348 ntBASIC12.1□□□□□ -0.47
Gtf3c6Q9D8P7 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.1□□□□□ -0.47
Gtf3c6Q9D8P7 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.1□□□□□ -0.47
Gtf3c6Q9D8P7 CT573047.1-201ENSMUST00000223652 851 ntBASIC12.1□□□□□ -0.47
Gtf3c6Q9D8P7 Gm1821-202ENSMUST00000227415 750 ntBASIC12.1□□□□□ -0.47
Gtf3c6Q9D8P7 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gtf3c6Q9D8P7 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Gtf3c6Q9D8P7 Olfr584-201ENSMUST00000098210 964 ntBASIC12.1□□□□□ -0.47
Gtf3c6Q9D8P7 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gtf3c6Q9D8P7 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Gtf3c6Q9D8P7 Mageb4-202ENSMUST00000113969 2403 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gtf3c6Q9D8P7 Mageb4-201ENSMUST00000096378 2401 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gtf3c6Q9D8P7 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gtf3c6Q9D8P7 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC12.1□□□□□ -0.47
Gtf3c6Q9D8P7 Rbpsuh-rs3-201ENSMUST00000182751 1441 ntBASIC12.1□□□□□ -0.47
Gtf3c6Q9D8P7 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gtf3c6Q9D8P7 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gtf3c6Q9D8P7 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Gtf3c6Q9D8P7 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC12.1□□□□□ -0.47
Gtf3c6Q9D8P7 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gtf3c6Q9D8P7 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Gtf3c6Q9D8P7 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Gtf3c6Q9D8P7 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Gpr35-202ENSMUST00000064480 3409 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Dhx32-202ENSMUST00000063669 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Igf2bp3-201ENSMUST00000031838 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Sfmbt1-202ENSMUST00000112184 2936 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Mup-ps29-201ENSMUST00000122281 202 ntBASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Mrip-ps-201ENSMUST00000184613 940 ntBASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Gm37246-201ENSMUST00000192665 835 ntBASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Gm43852-201ENSMUST00000202098 917 ntBASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Gm18539-201ENSMUST00000204745 1090 ntBASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 CT009546.1-201ENSMUST00000222573 1120 ntBASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 AC154290.1-201ENSMUST00000223786 1240 ntBASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 AC132260.2-201ENSMUST00000224482 344 ntBASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 AC159002.1-201ENSMUST00000226714 924 ntBASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Ginm1-202ENSMUST00000065124 300 ntBASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Rpl17-201ENSMUST00000079716 775 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Rd3l-202ENSMUST00000185354 1541 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Atp1a3-202ENSMUST00000102858 3895 ntTSL 2 BASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Slc26a1-202ENSMUST00000119270 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Slc26a1-204ENSMUST00000163328 3015 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Gtf3c6Q9D8P7 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms