Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Smc1aQ9CU62 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Smc1aQ9CU62 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC12.48□□□□□ -0.41
Smc1aQ9CU62 Thbs4-201ENSMUST00000022213 3198 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smc1aQ9CU62 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smc1aQ9CU62 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smc1aQ9CU62 Zfp68-203ENSMUST00000110905 4749 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smc1aQ9CU62 Gm26013-201ENSMUST00000104404 119 ntBASIC12.48□□□□□ -0.41
Smc1aQ9CU62 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smc1aQ9CU62 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smc1aQ9CU62 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smc1aQ9CU62 Gm22711-201ENSMUST00000116890 133 ntBASIC12.48□□□□□ -0.41
Smc1aQ9CU62 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC12.48□□□□□ -0.41
Smc1aQ9CU62 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC12.48□□□□□ -0.41
Smc1aQ9CU62 Gm15764-201ENSMUST00000150389 672 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Smc1aQ9CU62 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC12.48□□□□□ -0.41
Smc1aQ9CU62 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.48□□□□□ -0.41
Smc1aQ9CU62 Ccl19-ps3-201ENSMUST00000179634 324 ntBASIC12.48□□□□□ -0.41
Smc1aQ9CU62 Gm12407-201ENSMUST00000180219 324 ntBASIC12.48□□□□□ -0.41
Smc1aQ9CU62 Gm35986-201ENSMUST00000197370 655 ntTSL 2 BASIC12.48□□□□□ -0.41
Smc1aQ9CU62 Gm43002-201ENSMUST00000200310 155 ntBASIC12.48□□□□□ -0.41
Smc1aQ9CU62 Gm42657-201ENSMUST00000201746 211 ntBASIC12.48□□□□□ -0.41
Smc1aQ9CU62 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Smc1aQ9CU62 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC12.48□□□□□ -0.41
Smc1aQ9CU62 AC165260.2-203ENSMUST00000224237 336 ntBASIC12.48□□□□□ -0.41
Smc1aQ9CU62 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smc1aQ9CU62 Snu13-202ENSMUST00000080622 1283 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smc1aQ9CU62 Enpp4-201ENSMUST00000024757 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smc1aQ9CU62 Sdr9c7-201ENSMUST00000047134 2868 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smc1aQ9CU62 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Smc1aQ9CU62 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smc1aQ9CU62 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smc1aQ9CU62 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Smc1aQ9CU62 Eif3a-201ENSMUST00000025955 5176 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smc1aQ9CU62 Ift22-205ENSMUST00000200157 3071 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smc1aQ9CU62 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Smc1aQ9CU62 Ttll5-202ENSMUST00000040273 4147 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Smc1aQ9CU62 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smc1aQ9CU62 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smc1aQ9CU62 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smc1aQ9CU62 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.47□□□□□ -0.41
Smc1aQ9CU62 Gm44755-201ENSMUST00000207830 2102 ntBASIC12.47□□□□□ -0.41
Smc1aQ9CU62 Tsc2-201ENSMUST00000097373 6018 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smc1aQ9CU62 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smc1aQ9CU62 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smc1aQ9CU62 Olfr370-203ENSMUST00000214156 2475 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Smc1aQ9CU62 B3glct-201ENSMUST00000100404 4570 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smc1aQ9CU62 Txlna-201ENSMUST00000046425 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smc1aQ9CU62 Olfr46-203ENSMUST00000214180 7750 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Smc1aQ9CU62 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smc1aQ9CU62 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smc1aQ9CU62 Snap29-201ENSMUST00000023449 3429 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smc1aQ9CU62 Inpp5j-201ENSMUST00000044507 3370 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smc1aQ9CU62 Gm11033-203ENSMUST00000156185 2321 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smc1aQ9CU62 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Smc1aQ9CU62 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Smc1aQ9CU62 Gm25076-201ENSMUST00000104098 132 ntBASIC12.47□□□□□ -0.41
Smc1aQ9CU62 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.47□□□□□ -0.41
Smc1aQ9CU62 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC12.47□□□□□ -0.41
Smc1aQ9CU62 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC12.47□□□□□ -0.41
Smc1aQ9CU62 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC12.47□□□□□ -0.41
Smc1aQ9CU62 Gm24844-201ENSMUST00000158679 127 ntBASIC12.47□□□□□ -0.41
Smc1aQ9CU62 Gm26759-201ENSMUST00000181773 1251 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smc1aQ9CU62 Gm9034-201ENSMUST00000182071 1005 ntBASIC12.47□□□□□ -0.41
Smc1aQ9CU62 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC12.47□□□□□ -0.41
Smc1aQ9CU62 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smc1aQ9CU62 D3Ertd751e-215ENSMUST00000195882 680 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
Smc1aQ9CU62 AC124457.1-201ENSMUST00000198845 120 ntBASIC12.47□□□□□ -0.41
Smc1aQ9CU62 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC12.47□□□□□ -0.41
Smc1aQ9CU62 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC12.47□□□□□ -0.41
Smc1aQ9CU62 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC12.47□□□□□ -0.41
Smc1aQ9CU62 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.47□□□□□ -0.41
Smc1aQ9CU62 Rpl3l-201ENSMUST00000045186 1033 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smc1aQ9CU62 Fam25c-201ENSMUST00000052126 408 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smc1aQ9CU62 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smc1aQ9CU62 Fam45a-202ENSMUST00000119633 2267 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smc1aQ9CU62 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Smc1aQ9CU62 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smc1aQ9CU62 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smc1aQ9CU62 Glb1l2-207ENSMUST00000162702 2555 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smc1aQ9CU62 Fastkd5-201ENSMUST00000110262 3015 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Smc1aQ9CU62 Gm13652-201ENSMUST00000143898 3412 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smc1aQ9CU62 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smc1aQ9CU62 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Smc1aQ9CU62 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smc1aQ9CU62 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Smc1aQ9CU62 Loxl3-201ENSMUST00000000707 4098 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Smc1aQ9CU62 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC12.46□□□□□ -0.41
Smc1aQ9CU62 Exosc10-202ENSMUST00000076022 2682 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smc1aQ9CU62 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC12.46□□□□□ -0.41
Smc1aQ9CU62 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.41
Smc1aQ9CU62 Srgap3-202ENSMUST00000088373 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smc1aQ9CU62 Mtss1l-205ENSMUST00000144041 3225 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Smc1aQ9CU62 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smc1aQ9CU62 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smc1aQ9CU62 4930594M22Rik-202ENSMUST00000161599 3595 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Smc1aQ9CU62 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smc1aQ9CU62 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Smc1aQ9CU62 Gm16686-201ENSMUST00000141816 396 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Smc1aQ9CU62 Gm3150-201ENSMUST00000166418 204 ntBASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms