Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Rgr-203ENSMUST00000225070 4704 ntBASIC11.67□□□□□ -0.54
Pcdhb18Q91Y02 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC11.67□□□□□ -0.54
Pcdhb18Q91Y02 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Pcdhb18Q91Y02 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Grin2b-205ENSMUST00000152012 2461 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Zfp773-201ENSMUST00000032622 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Fxyd5-212ENSMUST00000162733 2998 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Gm38140-201ENSMUST00000193617 2755 ntBASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Ccdc90b-202ENSMUST00000085017 1494 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Ifitm1-202ENSMUST00000106040 560 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Ifitm1-203ENSMUST00000106042 882 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Gm11996-201ENSMUST00000117538 915 ntBASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Gm12389-201ENSMUST00000117696 418 ntBASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Gm14165-201ENSMUST00000121456 952 ntBASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Gm12756-201ENSMUST00000126294 599 ntTSL 3 BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Gm25343-201ENSMUST00000157460 107 ntBASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Gm16167-201ENSMUST00000160428 1065 ntBASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Gm5342-201ENSMUST00000181982 1003 ntBASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Gm26976-201ENSMUST00000182929 908 ntBASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Gm15469-201ENSMUST00000201750 961 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Gm44814-201ENSMUST00000207018 434 ntBASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Gm9102-201ENSMUST00000219250 465 ntBASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Id2-203ENSMUST00000222667 958 ntBASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Ifitm1-201ENSMUST00000026564 736 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Eng-201ENSMUST00000009705 3422 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Slc37a4-207ENSMUST00000215420 2128 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Gm43963-201ENSMUST00000203466 2488 ntBASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Rbm47-209ENSMUST00000201544 5211 ntAPPRIS P3 TSL 5 BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Zfp532-202ENSMUST00000169679 5003 ntTSL 5 BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Wwp2-201ENSMUST00000166615 4314 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Agpat3-211ENSMUST00000166360 3439 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Pcdhb18Q91Y02 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb18Q91Y02 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb18Q91Y02 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Pcdhb18Q91Y02 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb18Q91Y02 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb18Q91Y02 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC11.65□□□□□ -0.54
Pcdhb18Q91Y02 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb18Q91Y02 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb18Q91Y02 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb18Q91Y02 Gm21939-201ENSMUST00000221137 2773 ntBASIC11.65□□□□□ -0.54
Pcdhb18Q91Y02 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Pcdhb18Q91Y02 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb18Q91Y02 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb18Q91Y02 Gm3836-201ENSMUST00000211377 1613 ntBASIC11.65□□□□□ -0.54
Pcdhb18Q91Y02 Gnas-203ENSMUST00000087876 3719 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb18Q91Y02 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
Pcdhb18Q91Y02 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Pcdhb18Q91Y02 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb18Q91Y02 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.65□□□□□ -0.54
Pcdhb18Q91Y02 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb18Q91Y02 Zc3h18-205ENSMUST00000176629 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb18Q91Y02 Dsp-201ENSMUST00000124830 9592 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Pcdhb18Q91Y02 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb18Q91Y02 Fmr1nb-203ENSMUST00000114647 679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb18Q91Y02 Gm12948-201ENSMUST00000119406 682 ntBASIC11.65□□□□□ -0.54
Pcdhb18Q91Y02 Gm12943-201ENSMUST00000119616 210 ntBASIC11.65□□□□□ -0.54
Pcdhb18Q91Y02 Gm12712-201ENSMUST00000120676 801 ntBASIC11.65□□□□□ -0.54
Pcdhb18Q91Y02 Gm25545-201ENSMUST00000122673 323 ntBASIC11.65□□□□□ -0.54
Pcdhb18Q91Y02 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb18Q91Y02 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb18Q91Y02 Gm15569-201ENSMUST00000133675 594 ntTSL 3 BASIC11.65□□□□□ -0.54
Pcdhb18Q91Y02 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb18Q91Y02 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC11.65□□□□□ -0.54
Pcdhb18Q91Y02 Smim20-201ENSMUST00000147148 922 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Pcdhb18Q91Y02 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 67.7 ms