Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim60Q8VI40 2900011O08Rik-202ENSMUST00000118412 954 ntTSL 3 BASIC11.49□□□□□ -0.57
Trim60Q8VI40 Gm11941-201ENSMUST00000119904 610 ntBASIC11.49□□□□□ -0.57
Trim60Q8VI40 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
Trim60Q8VI40 Gm14017-201ENSMUST00000121934 386 ntBASIC11.49□□□□□ -0.57
Trim60Q8VI40 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim60Q8VI40 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.49□□□□□ -0.57
Trim60Q8VI40 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC11.49□□□□□ -0.57
Trim60Q8VI40 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC11.49□□□□□ -0.57
Trim60Q8VI40 Gm43186-201ENSMUST00000198130 824 ntBASIC11.49□□□□□ -0.57
Trim60Q8VI40 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC11.49□□□□□ -0.57
Trim60Q8VI40 Gm17825-201ENSMUST00000206836 794 ntBASIC11.49□□□□□ -0.57
Trim60Q8VI40 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim60Q8VI40 Gm45441-202ENSMUST00000209301 1235 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim60Q8VI40 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim60Q8VI40 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC11.49□□□□□ -0.57
Trim60Q8VI40 Itgb2-201ENSMUST00000000299 2970 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim60Q8VI40 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.49□□□□□ -0.57
Trim60Q8VI40 Mtus2-202ENSMUST00000085554 1009 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim60Q8VI40 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Trim60Q8VI40 Gm5703-201ENSMUST00000186658 3973 ntBASIC11.49□□□□□ -0.57
Trim60Q8VI40 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim60Q8VI40 Peg3-201ENSMUST00000051209 8694 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim60Q8VI40 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.49□□□□□ -0.57
Trim60Q8VI40 Egfr-201ENSMUST00000020329 10208 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim60Q8VI40 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim60Q8VI40 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim60Q8VI40 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC11.49□□□□□ -0.57
Trim60Q8VI40 Ddx3x-201ENSMUST00000000804 4692 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim60Q8VI40 Gm18198-201ENSMUST00000204986 1551 ntBASIC11.49□□□□□ -0.57
Trim60Q8VI40 Scrn1-201ENSMUST00000019268 4810 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim60Q8VI40 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trim60Q8VI40 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim60Q8VI40 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Trim60Q8VI40 Frmpd3-203ENSMUST00000208130 7314 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Trim60Q8VI40 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim60Q8VI40 1700010I14Rik-201ENSMUST00000024650 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
Trim60Q8VI40 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Trim60Q8VI40 Bcl7a-202ENSMUST00000117971 4642 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim60Q8VI40 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trim60Q8VI40 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim60Q8VI40 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim60Q8VI40 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trim60Q8VI40 Amotl1-201ENSMUST00000013220 8957 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim60Q8VI40 Ubap2-202ENSMUST00000108068 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim60Q8VI40 Ncf1-202ENSMUST00000111275 2721 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim60Q8VI40 Ahnak2-201ENSMUST00000101010 2821 ntAPPRIS ALT2 BASIC11.48□□□□□ -0.57
Trim60Q8VI40 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.48□□□□□ -0.57
Trim60Q8VI40 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim60Q8VI40 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trim60Q8VI40 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trim60Q8VI40 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim60Q8VI40 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.48□□□□□ -0.57
Trim60Q8VI40 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim60Q8VI40 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
Trim60Q8VI40 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC11.48□□□□□ -0.57
Trim60Q8VI40 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trim60Q8VI40 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC11.48□□□□□ -0.57
Trim60Q8VI40 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim60Q8VI40 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.48□□□□□ -0.57
Trim60Q8VI40 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim60Q8VI40 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trim60Q8VI40 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC11.48□□□□□ -0.57
Trim60Q8VI40 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trim60Q8VI40 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim60Q8VI40 Gm6580-201ENSMUST00000117504 1357 ntBASIC11.48□□□□□ -0.57
Trim60Q8VI40 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC11.48□□□□□ -0.57
Trim60Q8VI40 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC11.48□□□□□ -0.57
Trim60Q8VI40 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
Trim60Q8VI40 Optc-205ENSMUST00000153617 1615 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim60Q8VI40 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim60Q8VI40 Kcne2-201ENSMUST00000047383 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim60Q8VI40 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim60Q8VI40 CT009489.1-201ENSMUST00000227740 1893 ntBASIC11.48□□□□□ -0.57
Trim60Q8VI40 Aktip-203ENSMUST00000120349 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim60Q8VI40 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC11.48□□□□□ -0.57
Trim60Q8VI40 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim60Q8VI40 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim60Q8VI40 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim60Q8VI40 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim60Q8VI40 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim60Q8VI40 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trim60Q8VI40 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC11.47□□□□□ -0.57
Trim60Q8VI40 Fbxo8-201ENSMUST00000040218 3571 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim60Q8VI40 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim60Q8VI40 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trim60Q8VI40 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim60Q8VI40 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim60Q8VI40 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim60Q8VI40 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim60Q8VI40 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim60Q8VI40 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim60Q8VI40 Rpe65-202ENSMUST00000196999 1863 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim60Q8VI40 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim60Q8VI40 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC11.47□□□□□ -0.57
Trim60Q8VI40 Xlr4c-201ENSMUST00000068551 1500 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trim60Q8VI40 Fam110a-202ENSMUST00000109863 1284 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim60Q8VI40 Gm14058-201ENSMUST00000116082 735 ntBASIC11.47□□□□□ -0.57
Trim60Q8VI40 Gm12218-201ENSMUST00000117666 399 ntBASIC11.47□□□□□ -0.57
Trim60Q8VI40 Mageb17-ps-201ENSMUST00000117902 919 ntBASIC11.47□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms