Protein–RNA interactions for Protein: Q8CCS6

Pabpn1, Polyadenylate-binding protein 2, mousemouse

Known RBP Predictions only

Length 302 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1Q8CCS6 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
Pabpn1Q8CCS6 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pabpn1Q8CCS6 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Pabpn1Q8CCS6 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pabpn1Q8CCS6 Gm45706-201ENSMUST00000213063 2136 ntBASIC16.93■□□□□ 0.3
Pabpn1Q8CCS6 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Pabpn1Q8CCS6 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pabpn1Q8CCS6 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Pabpn1Q8CCS6 Tcf4-254ENSMUST00000202674 2615 ntTSL 5 BASIC16.92■□□□□ 0.3
Pabpn1Q8CCS6 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pabpn1Q8CCS6 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pabpn1Q8CCS6 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC16.92■□□□□ 0.3
Pabpn1Q8CCS6 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pabpn1Q8CCS6 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pabpn1Q8CCS6 A630023P12Rik-203ENSMUST00000141532 638 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Pabpn1Q8CCS6 Gm15347-201ENSMUST00000145372 385 ntTSL 3 BASIC16.92■□□□□ 0.3
Pabpn1Q8CCS6 Gm7847-201ENSMUST00000151645 777 ntBASIC16.92■□□□□ 0.3
Pabpn1Q8CCS6 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Pabpn1Q8CCS6 Psd3-211ENSMUST00000178529 828 ntTSL 5 BASIC16.92■□□□□ 0.3
Pabpn1Q8CCS6 E330020D12Rik-203ENSMUST00000188717 766 ntTSL 2 BASIC16.92■□□□□ 0.3
Pabpn1Q8CCS6 Gm6342-201ENSMUST00000204344 766 ntBASIC16.92■□□□□ 0.3
Pabpn1Q8CCS6 Msra-204ENSMUST00000210363 1042 ntTSL 5 BASIC16.92■□□□□ 0.3
Pabpn1Q8CCS6 Flt3l-210ENSMUST00000211246 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pabpn1Q8CCS6 Gm45795-201ENSMUST00000211847 400 ntBASIC16.92■□□□□ 0.3
Pabpn1Q8CCS6 Defa21-201ENSMUST00000076754 418 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pabpn1Q8CCS6 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pabpn1Q8CCS6 Gab3-202ENSMUST00000114104 1705 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Pabpn1Q8CCS6 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pabpn1Q8CCS6 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pabpn1Q8CCS6 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Pabpn1Q8CCS6 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pabpn1Q8CCS6 Ntf3-203ENSMUST00000204542 1343 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Pabpn1Q8CCS6 Gm13169-201ENSMUST00000122090 1459 ntBASIC16.92■□□□□ 0.3
Pabpn1Q8CCS6 Gm45428-201ENSMUST00000209619 1789 ntBASIC16.92■□□□□ 0.3
Pabpn1Q8CCS6 Ctss-201ENSMUST00000015667 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pabpn1Q8CCS6 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pabpn1Q8CCS6 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Pabpn1Q8CCS6 Fmo3-201ENSMUST00000028010 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pabpn1Q8CCS6 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pabpn1Q8CCS6 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pabpn1Q8CCS6 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pabpn1Q8CCS6 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Pabpn1Q8CCS6 Mbnl2-204ENSMUST00000227012 2390 ntBASIC16.91■□□□□ 0.3
Pabpn1Q8CCS6 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pabpn1Q8CCS6 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC16.91■□□□□ 0.3
Pabpn1Q8CCS6 Tdrkh-203ENSMUST00000196386 1050 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pabpn1Q8CCS6 Gm39090-201ENSMUST00000205284 972 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Pabpn1Q8CCS6 Gm6426-201ENSMUST00000209048 854 ntBASIC16.91■□□□□ 0.3
Pabpn1Q8CCS6 AC155293.1-201ENSMUST00000219793 1026 ntBASIC16.91■□□□□ 0.3
Pabpn1Q8CCS6 Xlr4b-201ENSMUST00000069077 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pabpn1Q8CCS6 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pabpn1Q8CCS6 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pabpn1Q8CCS6 Tgm2-201ENSMUST00000103122 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pabpn1Q8CCS6 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pabpn1Q8CCS6 Scmh1-203ENSMUST00000106298 1995 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pabpn1Q8CCS6 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pabpn1Q8CCS6 Milr1-201ENSMUST00000086353 1348 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pabpn1Q8CCS6 Gm44629-201ENSMUST00000206951 1840 ntBASIC16.91■□□□□ 0.3
Pabpn1Q8CCS6 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
Pabpn1Q8CCS6 Mamld1-202ENSMUST00000114629 3346 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Pabpn1Q8CCS6 Gm43773-201ENSMUST00000198548 2162 ntBASIC16.91■□□□□ 0.3
Pabpn1Q8CCS6 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Pabpn1Q8CCS6 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pabpn1Q8CCS6 Trit1-201ENSMUST00000102649 2074 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pabpn1Q8CCS6 Slc35b3-201ENSMUST00000021870 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pabpn1Q8CCS6 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pabpn1Q8CCS6 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pabpn1Q8CCS6 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pabpn1Q8CCS6 Galnt6-202ENSMUST00000159715 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pabpn1Q8CCS6 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Pabpn1Q8CCS6 Tmc8-204ENSMUST00000119455 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pabpn1Q8CCS6 Ppp1r18-202ENSMUST00000122899 2743 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pabpn1Q8CCS6 Gm13472-201ENSMUST00000120948 314 ntBASIC16.9■□□□□ 0.3
Pabpn1Q8CCS6 Gm40-201ENSMUST00000122131 660 ntBASIC16.9■□□□□ 0.3
Pabpn1Q8CCS6 Gm14323-201ENSMUST00000122418 627 ntBASIC16.9■□□□□ 0.3
Pabpn1Q8CCS6 Gm17120-201ENSMUST00000164734 743 ntTSL 3 BASIC16.9■□□□□ 0.3
Pabpn1Q8CCS6 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC16.9■□□□□ 0.3
Pabpn1Q8CCS6 Gm6098-201ENSMUST00000180234 330 ntBASIC16.9■□□□□ 0.3
Pabpn1Q8CCS6 5730420D15Rik-201ENSMUST00000181781 1182 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pabpn1Q8CCS6 Zfp422-ps-201ENSMUST00000182230 706 ntBASIC16.9■□□□□ 0.3
Pabpn1Q8CCS6 Gm16470-201ENSMUST00000182456 998 ntBASIC16.9■□□□□ 0.3
Pabpn1Q8CCS6 1700084F23Rik-201ENSMUST00000186662 1044 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pabpn1Q8CCS6 Gm2316-201ENSMUST00000190613 921 ntBASIC16.9■□□□□ 0.3
Pabpn1Q8CCS6 Gm40414-201ENSMUST00000197608 481 ntBASIC16.9■□□□□ 0.3
Pabpn1Q8CCS6 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC16.9■□□□□ 0.3
Pabpn1Q8CCS6 Tpi-rs11-201ENSMUST00000202145 310 ntBASIC16.9■□□□□ 0.3
Pabpn1Q8CCS6 Gm36550-201ENSMUST00000221947 416 ntTSL 3 BASIC16.9■□□□□ 0.3
Pabpn1Q8CCS6 Hsd17b3-204ENSMUST00000222783 1184 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Pabpn1Q8CCS6 CT025579.2-201ENSMUST00000225280 816 ntBASIC16.9■□□□□ 0.3
Pabpn1Q8CCS6 Gm10015-201ENSMUST00000072570 465 ntBASIC16.9■□□□□ 0.3
Pabpn1Q8CCS6 Clec10a-202ENSMUST00000102571 1496 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pabpn1Q8CCS6 Ssr3-202ENSMUST00000119896 1469 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pabpn1Q8CCS6 Abcc9-205ENSMUST00000204870 1458 ntTSL 2 BASIC16.9■□□□□ 0.3
Pabpn1Q8CCS6 Anapc15-203ENSMUST00000098237 1328 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Pabpn1Q8CCS6 Gm45076-201ENSMUST00000207517 1517 ntTSL 5 BASIC16.9■□□□□ 0.3
Pabpn1Q8CCS6 Ubap2l-203ENSMUST00000090908 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pabpn1Q8CCS6 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Pabpn1Q8CCS6 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Pabpn1Q8CCS6 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Pabpn1Q8CCS6 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC16.89■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms