Protein–RNA interactions for Protein: Q6PFF0

Scaf4, SR-related CTD-associated factor 4, mousemouse

Known RBP Predictions only

Length 1,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf4Q6PFF0 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Gm45675-201ENSMUST00000211202 3429 ntBASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Nrf1-208ENSMUST00000115208 2492 ntTSL 5 BASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Pik3r5-201ENSMUST00000021283 4370 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Fsd2-201ENSMUST00000042318 3985 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Crry-ps-201ENSMUST00000079090 1309 ntBASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Gm22323-201ENSMUST00000103832 109 ntBASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Gm13263-201ENSMUST00000121271 838 ntBASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Gm25881-201ENSMUST00000157783 103 ntBASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Gm43438-201ENSMUST00000198133 379 ntBASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 AC154436.1-201ENSMUST00000227272 782 ntBASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Lrba-202ENSMUST00000192145 8843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 4921513H07Rik-201ENSMUST00000201403 2238 ntBASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Gm7742-201ENSMUST00000167648 1527 ntBASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Gm7732-201ENSMUST00000170486 1527 ntBASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Gm7740-201ENSMUST00000186171 1527 ntBASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Gm19680-201ENSMUST00000095050 1513 ntBASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Gm7736-201ENSMUST00000096981 1527 ntBASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Dip2a-205ENSMUST00000160048 6551 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Platr4-203ENSMUST00000199155 2161 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Zfp605-202ENSMUST00000112528 3158 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Marveld2-201ENSMUST00000022137 3061 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 Gm38901-201ENSMUST00000202448 3008 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Scaf4Q6PFF0 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 Apobec3-205ENSMUST00000175752 1977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 Sirpa-204ENSMUST00000103203 3674 ntAPPRIS P3 TSL 5 BASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 Tnfsf13b-203ENSMUST00000207792 4771 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 Capn5-201ENSMUST00000040971 4498 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 Gm19040-201ENSMUST00000203280 4726 ntBASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 Gm12218-201ENSMUST00000117666 399 ntBASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 Gm27246-201ENSMUST00000183611 1240 ntTSL 5 BASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 Gm43758-201ENSMUST00000199500 367 ntBASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 Gm42859-201ENSMUST00000199572 193 ntBASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 Gm7118-201ENSMUST00000200167 1003 ntBASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 AC153961.1-201ENSMUST00000217760 385 ntBASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 CT009713.8-202ENSMUST00000224732 385 ntBASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 Ticam1-201ENSMUST00000058136 2992 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 Gm17383-201ENSMUST00000078739 1041 ntBASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 Gm10288-201ENSMUST00000084614 537 ntBASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 Slco5a1-201ENSMUST00000115402 3690 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Scaf4Q6PFF0 Gm44103-201ENSMUST00000204364 3662 ntBASIC10.91□□□□□ -0.66
Scaf4Q6PFF0 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 51.8 ms