Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 1110051M20Rik-202ENSMUST00000094835 1498 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Bace1-202ENSMUST00000078111 4041 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Ptbp3-201ENSMUST00000030076 6855 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Pou2f1-206ENSMUST00000111429 2679 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Gm40617-201ENSMUST00000218840 2420 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Smarcd3Q6P9Z1 Ces3b-202ENSMUST00000093221 2403 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smarcd3Q6P9Z1 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smarcd3Q6P9Z1 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Smarcd3Q6P9Z1 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Smarcd3Q6P9Z1 Gm43482-201ENSMUST00000202797 1861 ntBASIC10.19□□□□□ -0.78
Smarcd3Q6P9Z1 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Smarcd3Q6P9Z1 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smarcd3Q6P9Z1 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smarcd3Q6P9Z1 AC124433.1-202ENSMUST00000224762 1535 ntBASIC10.19□□□□□ -0.78
Smarcd3Q6P9Z1 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smarcd3Q6P9Z1 Gm7993-201ENSMUST00000200970 1384 ntBASIC10.19□□□□□ -0.78
Smarcd3Q6P9Z1 Ism2-201ENSMUST00000051601 1350 ntTSL 5 BASIC10.19□□□□□ -0.78
Smarcd3Q6P9Z1 Gm24891-201ENSMUST00000104391 136 ntBASIC10.19□□□□□ -0.78
Smarcd3Q6P9Z1 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC10.19□□□□□ -0.78
Smarcd3Q6P9Z1 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smarcd3Q6P9Z1 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC10.19□□□□□ -0.78
Smarcd3Q6P9Z1 Gm13461-201ENSMUST00000120980 662 ntBASIC10.19□□□□□ -0.78
Smarcd3Q6P9Z1 Gm8199-201ENSMUST00000121323 823 ntBASIC10.19□□□□□ -0.78
Smarcd3Q6P9Z1 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC10.19□□□□□ -0.78
Smarcd3Q6P9Z1 Gm3150-201ENSMUST00000166418 204 ntBASIC10.19□□□□□ -0.78
Smarcd3Q6P9Z1 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC10.19□□□□□ -0.78
Smarcd3Q6P9Z1 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC10.19□□□□□ -0.78
Smarcd3Q6P9Z1 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC10.19□□□□□ -0.78
Smarcd3Q6P9Z1 Gm29199-201ENSMUST00000187766 775 ntBASIC10.19□□□□□ -0.78
Smarcd3Q6P9Z1 Gm4482-201ENSMUST00000200876 742 ntBASIC10.19□□□□□ -0.78
Smarcd3Q6P9Z1 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Smarcd3Q6P9Z1 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC10.19□□□□□ -0.78
Smarcd3Q6P9Z1 Gm5996-201ENSMUST00000211110 718 ntBASIC10.19□□□□□ -0.78
Smarcd3Q6P9Z1 CT573034.1-201ENSMUST00000222983 313 ntBASIC10.19□□□□□ -0.78
Smarcd3Q6P9Z1 Tex35-201ENSMUST00000027884 909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smarcd3Q6P9Z1 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smarcd3Q6P9Z1 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smarcd3Q6P9Z1 Nav2-204ENSMUST00000183659 7765 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Smarcd3Q6P9Z1 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smarcd3Q6P9Z1 Prdm16-203ENSMUST00000097759 8544 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Smarcd3Q6P9Z1 Mms19-201ENSMUST00000026168 3162 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Smarcd3Q6P9Z1 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smarcd3Q6P9Z1 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Smarcd3Q6P9Z1 Trim65-202ENSMUST00000106440 4040 ntTSL 5 BASIC10.19□□□□□ -0.78
Smarcd3Q6P9Z1 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Smarcd3Q6P9Z1 Sh3gl2-201ENSMUST00000030212 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smarcd3Q6P9Z1 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smarcd3Q6P9Z1 Nos3-202ENSMUST00000115090 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smarcd3Q6P9Z1 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC10.19□□□□□ -0.78
Smarcd3Q6P9Z1 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC10.19□□□□□ -0.78
Smarcd3Q6P9Z1 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Gm38271-201ENSMUST00000192296 1603 ntBASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 AC174797.1-201ENSMUST00000224339 1649 ntBASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Atad5-201ENSMUST00000017694 7272 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Trp53inp2-201ENSMUST00000043237 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Mkl1-204ENSMUST00000134469 4392 ntTSL 5 BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Brsk2-216ENSMUST00000174499 4223 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Bsnd-201ENSMUST00000054472 2756 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Dubr-204ENSMUST00000186944 2052 ntTSL 2 BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Tmem154-201ENSMUST00000107682 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Gm42602-201ENSMUST00000200288 3224 ntBASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Ifitm10-203ENSMUST00000105988 824 ntAPPRIS P4 TSL 2 BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Olfr1258-202ENSMUST00000111516 936 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Gm11573-201ENSMUST00000119956 394 ntBASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Gm14017-201ENSMUST00000121934 386 ntBASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Hspb9-202ENSMUST00000169833 726 ntAPPRIS P2 BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 H2al1g-201ENSMUST00000179859 509 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Gm2383-201ENSMUST00000181461 807 ntBASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Itgax-203ENSMUST00000205460 1215 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Pbld1-204ENSMUST00000219045 602 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Mir433-201ENSMUST00000093564 124 ntBASIC10.18□□□□□ -0.78
Smarcd3Q6P9Z1 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms