Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Usp49Q6P9L4 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Usp49Q6P9L4 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp49Q6P9L4 1700088E04Rik-203ENSMUST00000186053 535 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usp49Q6P9L4 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC12.43□□□□□ -0.42
Usp49Q6P9L4 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usp49Q6P9L4 AC134248.1-201ENSMUST00000216113 1176 ntBASIC12.43□□□□□ -0.42
Usp49Q6P9L4 AC122876.1-201ENSMUST00000217619 825 ntBASIC12.43□□□□□ -0.42
Usp49Q6P9L4 Gm19046-201ENSMUST00000221263 1298 ntBASIC12.43□□□□□ -0.42
Usp49Q6P9L4 CT030637.1-201ENSMUST00000228016 669 ntBASIC12.43□□□□□ -0.42
Usp49Q6P9L4 Gm10263-201ENSMUST00000085163 300 ntBASIC12.43□□□□□ -0.42
Usp49Q6P9L4 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Usp49Q6P9L4 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp49Q6P9L4 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp49Q6P9L4 Rims4-201ENSMUST00000044734 4962 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp49Q6P9L4 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp49Q6P9L4 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Usp49Q6P9L4 Gm45675-201ENSMUST00000211202 3429 ntBASIC12.43□□□□□ -0.42
Usp49Q6P9L4 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Usp49Q6P9L4 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Usp49Q6P9L4 Tesk2-201ENSMUST00000045542 3033 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Usp49Q6P9L4 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC12.43□□□□□ -0.42
Usp49Q6P9L4 Bcl2-202ENSMUST00000189999 2841 ntBASIC12.43□□□□□ -0.42
Usp49Q6P9L4 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp49Q6P9L4 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Usp49Q6P9L4 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp49Q6P9L4 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usp49Q6P9L4 Gabarapl2-201ENSMUST00000034428 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp49Q6P9L4 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp49Q6P9L4 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp49Q6P9L4 Rbbp5-201ENSMUST00000027700 3385 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Usp49Q6P9L4 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Usp49Q6P9L4 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Usp49Q6P9L4 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp49Q6P9L4 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Usp49Q6P9L4 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Usp49Q6P9L4 Gm14314-201ENSMUST00000118225 1015 ntBASIC12.42□□□□□ -0.42
Usp49Q6P9L4 Gm15486-201ENSMUST00000135147 604 ntTSL 3 BASIC12.42□□□□□ -0.42
Usp49Q6P9L4 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.42□□□□□ -0.42
Usp49Q6P9L4 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC12.42□□□□□ -0.42
Usp49Q6P9L4 Gm24074-201ENSMUST00000158178 260 ntBASIC12.42□□□□□ -0.42
Usp49Q6P9L4 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp49Q6P9L4 Gm19015-201ENSMUST00000184002 1189 ntBASIC12.42□□□□□ -0.42
Usp49Q6P9L4 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Usp49Q6P9L4 Gm29261-201ENSMUST00000188535 678 ntTSL 5 BASIC12.42□□□□□ -0.42
Usp49Q6P9L4 Gm43667-201ENSMUST00000198616 1095 ntBASIC12.42□□□□□ -0.42
Usp49Q6P9L4 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC12.42□□□□□ -0.42
Usp49Q6P9L4 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC12.42□□□□□ -0.42
Usp49Q6P9L4 AC125486.1-201ENSMUST00000218701 320 ntBASIC12.42□□□□□ -0.42
Usp49Q6P9L4 Gm9111-201ENSMUST00000219394 709 ntBASIC12.42□□□□□ -0.42
Usp49Q6P9L4 Gm46336-201ENSMUST00000221894 279 ntTSL 5 BASIC12.42□□□□□ -0.42
Usp49Q6P9L4 AC115122.1-201ENSMUST00000224850 1040 ntBASIC12.42□□□□□ -0.42
Usp49Q6P9L4 AC159103.1-201ENSMUST00000228325 429 ntBASIC12.42□□□□□ -0.42
Usp49Q6P9L4 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp49Q6P9L4 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Usp49Q6P9L4 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Usp49Q6P9L4 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC12.42□□□□□ -0.42
Usp49Q6P9L4 Tmem140-201ENSMUST00000074949 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp49Q6P9L4 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp49Q6P9L4 Fscn3-201ENSMUST00000031719 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp49Q6P9L4 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Usp49Q6P9L4 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp49Q6P9L4 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.42□□□□□ -0.42
Usp49Q6P9L4 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp49Q6P9L4 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.42□□□□□ -0.42
Usp49Q6P9L4 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Usp49Q6P9L4 Ccdc130-202ENSMUST00000098578 2119 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp49Q6P9L4 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Usp49Q6P9L4 Sel1l-210ENSMUST00000178462 6150 ntTSL 5 BASIC12.41□□□□□ -0.42
Usp49Q6P9L4 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Usp49Q6P9L4 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp49Q6P9L4 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp49Q6P9L4 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC12.41□□□□□ -0.42
Usp49Q6P9L4 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Usp49Q6P9L4 Camk2a-205ENSMUST00000115297 499 ntTSL 2 BASIC12.41□□□□□ -0.42
Usp49Q6P9L4 Cspp1-204ENSMUST00000119714 1268 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Usp49Q6P9L4 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp49Q6P9L4 Gm6485-201ENSMUST00000160676 439 ntBASIC12.41□□□□□ -0.42
Usp49Q6P9L4 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC12.41□□□□□ -0.42
Usp49Q6P9L4 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Usp49Q6P9L4 Gm17391-201ENSMUST00000171036 126 ntBASIC12.41□□□□□ -0.42
Usp49Q6P9L4 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp49Q6P9L4 Gm17709-201ENSMUST00000174536 1096 ntBASIC12.41□□□□□ -0.42
Usp49Q6P9L4 Gm23771-201ENSMUST00000178702 110 ntBASIC12.41□□□□□ -0.42
Usp49Q6P9L4 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Usp49Q6P9L4 Kbtbd12-206ENSMUST00000184878 3351 ntTSL 5 BASIC12.41□□□□□ -0.42
Usp49Q6P9L4 Gm27910-201ENSMUST00000185004 107 ntBASIC12.41□□□□□ -0.42
Usp49Q6P9L4 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC12.41□□□□□ -0.42
Usp49Q6P9L4 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Usp49Q6P9L4 Ghrl-204ENSMUST00000203770 891 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp49Q6P9L4 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC12.41□□□□□ -0.42
Usp49Q6P9L4 Gm29961-201ENSMUST00000214692 644 ntTSL 5 BASIC12.41□□□□□ -0.42
Usp49Q6P9L4 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.41□□□□□ -0.42
Usp49Q6P9L4 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp49Q6P9L4 Gm6430-201ENSMUST00000054664 1248 ntBASIC12.41□□□□□ -0.42
Usp49Q6P9L4 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp49Q6P9L4 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp49Q6P9L4 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Usp49Q6P9L4 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Usp49Q6P9L4 Immt-205ENSMUST00000166938 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms