Protein–RNA interactions for Protein: Q6KCD5

Nipbl, Nipped-B-like protein, mousemouse

Known RBP Predictions only

Length 2,798 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NipblQ6KCD5 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
NipblQ6KCD5 Epp13-201ENSMUST00000121024 957 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
NipblQ6KCD5 Smim6-201ENSMUST00000132961 978 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
NipblQ6KCD5 Gm6970-201ENSMUST00000169692 666 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
NipblQ6KCD5 1010001N08Rik-202ENSMUST00000181316 728 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
NipblQ6KCD5 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
NipblQ6KCD5 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC8.49□□□□□ -1.05
NipblQ6KCD5 Gm42751-201ENSMUST00000198065 559 ntBASIC8.49□□□□□ -1.05
NipblQ6KCD5 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
NipblQ6KCD5 Gm10254-201ENSMUST00000052888 867 ntBASIC8.49□□□□□ -1.05
NipblQ6KCD5 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC8.49□□□□□ -1.05
NipblQ6KCD5 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
NipblQ6KCD5 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
NipblQ6KCD5 Mmel1-203ENSMUST00000105634 2669 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
NipblQ6KCD5 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
NipblQ6KCD5 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
NipblQ6KCD5 Gm38100-202ENSMUST00000201297 1789 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
NipblQ6KCD5 Gm45428-201ENSMUST00000209619 1789 ntBASIC8.49□□□□□ -1.05
NipblQ6KCD5 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
NipblQ6KCD5 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
NipblQ6KCD5 Nucb2-203ENSMUST00000183175 1913 ntAPPRIS ALT1 TSL 1 (best) BASIC8.48□□□□□ -1.05
NipblQ6KCD5 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
NipblQ6KCD5 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
NipblQ6KCD5 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
NipblQ6KCD5 Zfp263-201ENSMUST00000023176 3241 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
NipblQ6KCD5 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
NipblQ6KCD5 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC8.48□□□□□ -1.05
NipblQ6KCD5 Gm43152-201ENSMUST00000202495 1638 ntBASIC8.48□□□□□ -1.05
NipblQ6KCD5 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
NipblQ6KCD5 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
NipblQ6KCD5 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
NipblQ6KCD5 Arl8b-201ENSMUST00000032196 4443 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
NipblQ6KCD5 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
NipblQ6KCD5 Gm22937-201ENSMUST00000103954 131 ntBASIC8.48□□□□□ -1.05
NipblQ6KCD5 Gm22495-201ENSMUST00000104492 126 ntBASIC8.48□□□□□ -1.05
NipblQ6KCD5 Gm8754-201ENSMUST00000118391 520 ntBASIC8.48□□□□□ -1.05
NipblQ6KCD5 Gm14633-201ENSMUST00000121152 470 ntBASIC8.48□□□□□ -1.05
NipblQ6KCD5 Gm11993-201ENSMUST00000121861 820 ntBASIC8.48□□□□□ -1.05
NipblQ6KCD5 Gm8464-202ENSMUST00000146697 1142 ntBASIC8.48□□□□□ -1.05
NipblQ6KCD5 Gm4750-201ENSMUST00000151942 1142 ntBASIC8.48□□□□□ -1.05
NipblQ6KCD5 Gm25947-201ENSMUST00000180343 110 ntBASIC8.48□□□□□ -1.05
NipblQ6KCD5 Gm38324-201ENSMUST00000194390 411 ntTSL 3 BASIC8.48□□□□□ -1.05
NipblQ6KCD5 Gm42687-201ENSMUST00000199075 164 ntBASIC8.48□□□□□ -1.05
NipblQ6KCD5 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC8.48□□□□□ -1.05
NipblQ6KCD5 Rnf181-202ENSMUST00000069595 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
NipblQ6KCD5 Gm8618-201ENSMUST00000097570 432 ntBASIC8.48□□□□□ -1.05
NipblQ6KCD5 Mei1-201ENSMUST00000089178 3974 ntAPPRIS ALT2 TSL 5 BASIC8.48□□□□□ -1.05
NipblQ6KCD5 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
NipblQ6KCD5 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
NipblQ6KCD5 Slc44a4-202ENSMUST00000169230 2246 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
NipblQ6KCD5 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
NipblQ6KCD5 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
NipblQ6KCD5 Cttn-201ENSMUST00000033407 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
NipblQ6KCD5 Gm20758-201ENSMUST00000220339 2171 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
NipblQ6KCD5 Fga-201ENSMUST00000029630 2083 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
NipblQ6KCD5 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
NipblQ6KCD5 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
NipblQ6KCD5 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
NipblQ6KCD5 Gm14005-209ENSMUST00000224993 1832 ntBASIC8.48□□□□□ -1.05
NipblQ6KCD5 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC8.48□□□□□ -1.05
NipblQ6KCD5 Rpl7a-ps11-201ENSMUST00000118791 801 ntBASIC8.48□□□□□ -1.05
NipblQ6KCD5 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
NipblQ6KCD5 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC8.48□□□□□ -1.05
NipblQ6KCD5 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
NipblQ6KCD5 Gm5808-201ENSMUST00000178090 357 ntBASIC8.48□□□□□ -1.05
NipblQ6KCD5 Gm7928-201ENSMUST00000181249 701 ntBASIC8.48□□□□□ -1.05
NipblQ6KCD5 Gm7516-201ENSMUST00000186198 706 ntBASIC8.48□□□□□ -1.05
NipblQ6KCD5 Prm2-202ENSMUST00000189593 674 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
NipblQ6KCD5 Gm19918-201ENSMUST00000194858 400 ntBASIC8.48□□□□□ -1.05
NipblQ6KCD5 Gm8643-201ENSMUST00000195228 625 ntBASIC8.48□□□□□ -1.05
NipblQ6KCD5 Gm44008-201ENSMUST00000204345 412 ntBASIC8.48□□□□□ -1.05
NipblQ6KCD5 Chac2-201ENSMUST00000020553 1018 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
NipblQ6KCD5 Chordc1-202ENSMUST00000213605 519 ntTSL 2 BASIC8.48□□□□□ -1.05
NipblQ6KCD5 AC153153.1-201ENSMUST00000225803 793 ntBASIC8.48□□□□□ -1.05
NipblQ6KCD5 CT010505.2-201ENSMUST00000227918 998 ntBASIC8.48□□□□□ -1.05
NipblQ6KCD5 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
NipblQ6KCD5 Gm9244-201ENSMUST00000056767 2129 ntBASIC8.48□□□□□ -1.05
NipblQ6KCD5 Gm16477-201ENSMUST00000085365 801 ntBASIC8.48□□□□□ -1.05
NipblQ6KCD5 Gm17415-201ENSMUST00000096427 789 ntBASIC8.48□□□□□ -1.05
NipblQ6KCD5 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
NipblQ6KCD5 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
NipblQ6KCD5 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
NipblQ6KCD5 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC8.48□□□□□ -1.05
NipblQ6KCD5 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
NipblQ6KCD5 Ndufab1-201ENSMUST00000033157 3479 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
NipblQ6KCD5 Slc1a4-202ENSMUST00000109594 3926 ntAPPRIS P2 TSL 1 (best) BASIC8.48□□□□□ -1.05
NipblQ6KCD5 Bcl11a-201ENSMUST00000000881 3061 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
NipblQ6KCD5 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
NipblQ6KCD5 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
NipblQ6KCD5 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
NipblQ6KCD5 Gm44663-201ENSMUST00000206898 3150 ntBASIC8.47□□□□□ -1.05
NipblQ6KCD5 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
NipblQ6KCD5 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
NipblQ6KCD5 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
NipblQ6KCD5 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
NipblQ6KCD5 Gm1995-201ENSMUST00000220838 2602 ntBASIC8.47□□□□□ -1.05
NipblQ6KCD5 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
NipblQ6KCD5 CT009757.3-201ENSMUST00000223367 2320 ntBASIC8.47□□□□□ -1.05
NipblQ6KCD5 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC8.47□□□□□ -1.05
NipblQ6KCD5 Vrk1-201ENSMUST00000021539 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC8.47□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms