Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Tnfaip3Q60769 Sox8-201ENSMUST00000025003 3000 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Tnfaip3Q60769 Gm7964-201ENSMUST00000051522 1378 ntBASIC10.52□□□□□ -0.72
Tnfaip3Q60769 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Tnfaip3Q60769 Spata13-207ENSMUST00000160973 7467 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Tnfaip3Q60769 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Tnfaip3Q60769 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Tnfaip3Q60769 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.72
Tnfaip3Q60769 Bdh1-203ENSMUST00000115227 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Tnfaip3Q60769 Oprm1-203ENSMUST00000056385 1440 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfaip3Q60769 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC10.52□□□□□ -0.73
Tnfaip3Q60769 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfaip3Q60769 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Tnfaip3Q60769 Foxred1-201ENSMUST00000043805 2232 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfaip3Q60769 Phactr1-213ENSMUST00000148891 5307 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfaip3Q60769 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfaip3Q60769 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Tnfaip3Q60769 Ralyl-202ENSMUST00000108373 267 ntTSL 5 BASIC10.52□□□□□ -0.73
Tnfaip3Q60769 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Tnfaip3Q60769 Gm12194-201ENSMUST00000117756 1012 ntBASIC10.52□□□□□ -0.73
Tnfaip3Q60769 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfaip3Q60769 Gm10169-201ENSMUST00000121822 348 ntBASIC10.52□□□□□ -0.73
Tnfaip3Q60769 Mup-ps29-201ENSMUST00000122281 202 ntBASIC10.52□□□□□ -0.73
Tnfaip3Q60769 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC10.52□□□□□ -0.73
Tnfaip3Q60769 Gm38389-201ENSMUST00000147871 653 ntTSL 3 BASIC10.52□□□□□ -0.73
Tnfaip3Q60769 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC10.52□□□□□ -0.73
Tnfaip3Q60769 Dpf3-206ENSMUST00000177959 1298 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfaip3Q60769 Gm16938-201ENSMUST00000180517 464 ntTSL 5 BASIC10.52□□□□□ -0.73
Tnfaip3Q60769 Mir6407-201ENSMUST00000184510 101 ntBASIC10.52□□□□□ -0.73
Tnfaip3Q60769 Gm28324-201ENSMUST00000187913 264 ntBASIC10.52□□□□□ -0.73
Tnfaip3Q60769 Gm5100-201ENSMUST00000195631 589 ntBASIC10.52□□□□□ -0.73
Tnfaip3Q60769 Gm43380-201ENSMUST00000200421 220 ntBASIC10.52□□□□□ -0.73
Tnfaip3Q60769 Crcp-204ENSMUST00000202163 931 ntTSL 2 BASIC10.52□□□□□ -0.73
Tnfaip3Q60769 AC122024.3-201ENSMUST00000217719 294 ntBASIC10.52□□□□□ -0.73
Tnfaip3Q60769 Olfr335-ps-201ENSMUST00000223545 939 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Tnfaip3Q60769 AC132901.1-201ENSMUST00000224345 508 ntBASIC10.52□□□□□ -0.73
Tnfaip3Q60769 AC164618.2-201ENSMUST00000224770 573 ntBASIC10.52□□□□□ -0.73
Tnfaip3Q60769 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfaip3Q60769 S1pr2-201ENSMUST00000054197 6394 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfaip3Q60769 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Tnfaip3Q60769 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfaip3Q60769 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Tnfaip3Q60769 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfaip3Q60769 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfaip3Q60769 Erich3-203ENSMUST00000189969 3460 ntBASIC10.52□□□□□ -0.73
Tnfaip3Q60769 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfaip3Q60769 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfaip3Q60769 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfaip3Q60769 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfaip3Q60769 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC10.52□□□□□ -0.73
Tnfaip3Q60769 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfaip3Q60769 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.52□□□□□ -0.73
Tnfaip3Q60769 Pbrm1-207ENSMUST00000112095 7907 ntTSL 5 BASIC10.52□□□□□ -0.73
Tnfaip3Q60769 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Tnfaip3Q60769 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfaip3Q60769 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Tnfaip3Q60769 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Tnfaip3Q60769 Serpine1-202ENSMUST00000077523 2697 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Tnfaip3Q60769 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfaip3Q60769 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfaip3Q60769 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Tnfaip3Q60769 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfaip3Q60769 Gm43127-201ENSMUST00000195890 2789 ntBASIC10.51□□□□□ -0.73
Tnfaip3Q60769 Thsd4-202ENSMUST00000098660 8796 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfaip3Q60769 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfaip3Q60769 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfaip3Q60769 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfaip3Q60769 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfaip3Q60769 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfaip3Q60769 Plin4-202ENSMUST00000190703 5756 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfaip3Q60769 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfaip3Q60769 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfaip3Q60769 Slc9a3-203ENSMUST00000221703 5118 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Tnfaip3Q60769 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.51□□□□□ -0.73
Tnfaip3Q60769 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfaip3Q60769 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfaip3Q60769 Gm13135-201ENSMUST00000117628 3121 ntBASIC10.51□□□□□ -0.73
Tnfaip3Q60769 Gm15197-201ENSMUST00000120526 478 ntBASIC10.51□□□□□ -0.73
Tnfaip3Q60769 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfaip3Q60769 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC10.51□□□□□ -0.73
Tnfaip3Q60769 Gm25554-201ENSMUST00000158075 113 ntBASIC10.51□□□□□ -0.73
Tnfaip3Q60769 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC10.51□□□□□ -0.73
Tnfaip3Q60769 Olfr755-ps1-201ENSMUST00000173568 910 ntBASIC10.51□□□□□ -0.73
Tnfaip3Q60769 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfaip3Q60769 Mrip-ps-201ENSMUST00000184613 940 ntBASIC10.51□□□□□ -0.73
Tnfaip3Q60769 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC10.51□□□□□ -0.73
Tnfaip3Q60769 Gm3017-201ENSMUST00000203603 1126 ntBASIC10.51□□□□□ -0.73
Tnfaip3Q60769 Cdipt-204ENSMUST00000206346 806 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfaip3Q60769 Gm5599-201ENSMUST00000209602 788 ntBASIC10.51□□□□□ -0.73
Tnfaip3Q60769 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC10.51□□□□□ -0.73
Tnfaip3Q60769 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfaip3Q60769 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Tnfaip3Q60769 Gm10020-201ENSMUST00000081993 612 ntBASIC10.51□□□□□ -0.73
Tnfaip3Q60769 Crebrf-203ENSMUST00000142539 2674 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfaip3Q60769 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.51□□□□□ -0.73
Tnfaip3Q60769 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Tnfaip3Q60769 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Tnfaip3Q60769 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Tnfaip3Q60769 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.51□□□□□ -0.73
Tnfaip3Q60769 Myo16-201ENSMUST00000042103 6725 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms