Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC13.31□□□□□ -0.28
Vps54Q5SPW0 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC13.31□□□□□ -0.28
Vps54Q5SPW0 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vps54Q5SPW0 Gm11211-201ENSMUST00000143618 359 ntTSL 3 BASIC13.31□□□□□ -0.28
Vps54Q5SPW0 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC13.31□□□□□ -0.28
Vps54Q5SPW0 Vmn2r-ps54-203ENSMUST00000150856 1142 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vps54Q5SPW0 Zfp667-204ENSMUST00000153840 596 ntTSL 3 BASIC13.31□□□□□ -0.28
Vps54Q5SPW0 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vps54Q5SPW0 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC13.31□□□□□ -0.28
Vps54Q5SPW0 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC13.31□□□□□ -0.28
Vps54Q5SPW0 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vps54Q5SPW0 Gm26918-201ENSMUST00000182496 728 ntTSL 2 BASIC13.31□□□□□ -0.28
Vps54Q5SPW0 Gm9135-201ENSMUST00000182963 990 ntBASIC13.31□□□□□ -0.28
Vps54Q5SPW0 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC13.31□□□□□ -0.28
Vps54Q5SPW0 Gm9116-201ENSMUST00000192400 1018 ntBASIC13.31□□□□□ -0.28
Vps54Q5SPW0 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vps54Q5SPW0 Gm36074-201ENSMUST00000221383 591 ntTSL 5 BASIC13.31□□□□□ -0.28
Vps54Q5SPW0 AC154435.1-201ENSMUST00000223938 959 ntBASIC13.31□□□□□ -0.28
Vps54Q5SPW0 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps54Q5SPW0 Sapcd1-201ENSMUST00000040151 935 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps54Q5SPW0 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps54Q5SPW0 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps54Q5SPW0 Gm44106-201ENSMUST00000203153 1599 ntBASIC13.31□□□□□ -0.28
Vps54Q5SPW0 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps54Q5SPW0 Tmc7-201ENSMUST00000044195 4546 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps54Q5SPW0 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Vps54Q5SPW0 5830417I10Rik-201ENSMUST00000135913 6190 ntBASIC13.31□□□□□ -0.28
Vps54Q5SPW0 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Vps54Q5SPW0 Zc3h12a-201ENSMUST00000036188 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps54Q5SPW0 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps54Q5SPW0 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC13.3□□□□□ -0.28
Vps54Q5SPW0 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Vps54Q5SPW0 Ceacam1-205ENSMUST00000206171 1722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps54Q5SPW0 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC13.3□□□□□ -0.28
Vps54Q5SPW0 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.3□□□□□ -0.28
Vps54Q5SPW0 Gm42815-201ENSMUST00000198787 1470 ntBASIC13.3□□□□□ -0.28
Vps54Q5SPW0 Kdelc1-201ENSMUST00000027213 1765 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vps54Q5SPW0 Polr3c-201ENSMUST00000029741 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps54Q5SPW0 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Vps54Q5SPW0 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps54Q5SPW0 Miga2-201ENSMUST00000077977 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps54Q5SPW0 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps54Q5SPW0 Tra2b-204ENSMUST00000161286 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps54Q5SPW0 Gm25562-201ENSMUST00000104608 133 ntBASIC13.3□□□□□ -0.28
Vps54Q5SPW0 Gm13267-201ENSMUST00000142787 698 ntTSL 3 BASIC13.3□□□□□ -0.28
Vps54Q5SPW0 AU015836-205ENSMUST00000163458 911 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Vps54Q5SPW0 Gm16740-201ENSMUST00000181819 956 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vps54Q5SPW0 Gm45338-204ENSMUST00000210658 1105 ntTSL 5 BASIC13.3□□□□□ -0.28
Vps54Q5SPW0 D830035M03Rik-201ENSMUST00000213677 1041 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vps54Q5SPW0 CT025531.1-201ENSMUST00000214534 622 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vps54Q5SPW0 AC153887.1-201ENSMUST00000219154 1253 ntTSL 5 BASIC13.3□□□□□ -0.28
Vps54Q5SPW0 AC156501.1-201ENSMUST00000228219 270 ntBASIC13.3□□□□□ -0.28
Vps54Q5SPW0 Hbb-y-201ENSMUST00000033229 633 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps54Q5SPW0 4930555K19Rik-201ENSMUST00000060066 171 ntBASIC13.3□□□□□ -0.28
Vps54Q5SPW0 Olfr1339-201ENSMUST00000094832 948 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Vps54Q5SPW0 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps54Q5SPW0 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps54Q5SPW0 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC13.3□□□□□ -0.28
Vps54Q5SPW0 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Vps54Q5SPW0 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vps54Q5SPW0 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps54Q5SPW0 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps54Q5SPW0 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps54Q5SPW0 Ccdc129-201ENSMUST00000044729 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps54Q5SPW0 Kyat1-202ENSMUST00000113659 1367 ntTSL 5 BASIC13.3□□□□□ -0.28
Vps54Q5SPW0 Slc17a5-202ENSMUST00000117645 3114 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vps54Q5SPW0 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Vps54Q5SPW0 Nr1i3-201ENSMUST00000005820 1414 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps54Q5SPW0 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vps54Q5SPW0 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps54Q5SPW0 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vps54Q5SPW0 Adck1-201ENSMUST00000101165 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vps54Q5SPW0 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC13.29□□□□□ -0.28
Vps54Q5SPW0 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC13.29□□□□□ -0.28
Vps54Q5SPW0 Esr2-205ENSMUST00000218621 3342 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vps54Q5SPW0 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC13.29□□□□□ -0.28
Vps54Q5SPW0 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps54Q5SPW0 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps54Q5SPW0 Hacl1-212ENSMUST00000167066 1566 ntTSL 5 BASIC13.29□□□□□ -0.28
Vps54Q5SPW0 Src-204ENSMUST00000109531 3586 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Vps54Q5SPW0 Slc25a51-202ENSMUST00000116341 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps54Q5SPW0 Gm36940-201ENSMUST00000194281 2036 ntBASIC13.29□□□□□ -0.28
Vps54Q5SPW0 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vps54Q5SPW0 Abt1-201ENSMUST00000041782 4456 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps54Q5SPW0 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps54Q5SPW0 Cfi-201ENSMUST00000077918 2079 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps54Q5SPW0 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps54Q5SPW0 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps54Q5SPW0 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps54Q5SPW0 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps54Q5SPW0 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Vps54Q5SPW0 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Vps54Q5SPW0 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vps54Q5SPW0 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC13.29□□□□□ -0.28
Vps54Q5SPW0 Gm12389-201ENSMUST00000117696 418 ntBASIC13.29□□□□□ -0.28
Vps54Q5SPW0 Tmed5-203ENSMUST00000117759 482 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vps54Q5SPW0 Gm8876-201ENSMUST00000120768 1122 ntBASIC13.29□□□□□ -0.28
Vps54Q5SPW0 Hyal1-203ENSMUST00000123005 843 ntTSL 3 BASIC13.29□□□□□ -0.28
Vps54Q5SPW0 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Vps54Q5SPW0 Gm26555-201ENSMUST00000180452 1037 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms