Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim43aQ3TL54 Nexmif-202ENSMUST00000087879 10891 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim43aQ3TL54 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim43aQ3TL54 Gm44617-202ENSMUST00000209122 2763 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim43aQ3TL54 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Trim43aQ3TL54 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim43aQ3TL54 Ank2-214ENSMUST00000182547 2428 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trim43aQ3TL54 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim43aQ3TL54 Sept2-201ENSMUST00000027495 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim43aQ3TL54 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim43aQ3TL54 Myh1-202ENSMUST00000075734 6012 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim43aQ3TL54 Gm11735-201ENSMUST00000106377 1581 ntBASIC11.79□□□□□ -0.52
Trim43aQ3TL54 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Trim43aQ3TL54 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trim43aQ3TL54 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim43aQ3TL54 Pax6-225ENSMUST00000167211 2814 ntAPPRIS P3 TSL 5 BASIC11.78□□□□□ -0.52
Trim43aQ3TL54 Gm5380-201ENSMUST00000119296 2136 ntBASIC11.78□□□□□ -0.52
Trim43aQ3TL54 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim43aQ3TL54 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim43aQ3TL54 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trim43aQ3TL54 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim43aQ3TL54 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trim43aQ3TL54 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trim43aQ3TL54 Gm12915-201ENSMUST00000131381 1499 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim43aQ3TL54 Git1-202ENSMUST00000100812 3476 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trim43aQ3TL54 Ppp1r10-201ENSMUST00000087210 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim43aQ3TL54 AC154528.2-201ENSMUST00000228432 3023 ntBASIC11.78□□□□□ -0.52
Trim43aQ3TL54 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim43aQ3TL54 Gm12247-201ENSMUST00000117585 670 ntBASIC11.78□□□□□ -0.52
Trim43aQ3TL54 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC11.78□□□□□ -0.52
Trim43aQ3TL54 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim43aQ3TL54 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim43aQ3TL54 9230114K14Rik-203ENSMUST00000199547 437 ntTSL 3 BASIC11.78□□□□□ -0.52
Trim43aQ3TL54 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.78□□□□□ -0.52
Trim43aQ3TL54 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC11.78□□□□□ -0.52
Trim43aQ3TL54 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim43aQ3TL54 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC11.78□□□□□ -0.52
Trim43aQ3TL54 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim43aQ3TL54 C2cd5-204ENSMUST00000203187 3494 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim43aQ3TL54 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.78□□□□□ -0.52
Trim43aQ3TL54 Cad-204ENSMUST00000201182 6529 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trim43aQ3TL54 Nfya-201ENSMUST00000046719 3645 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trim43aQ3TL54 Gm44826-201ENSMUST00000207648 2332 ntBASIC11.77□□□□□ -0.52
Trim43aQ3TL54 Dnmt3a-218ENSMUST00000174817 8737 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trim43aQ3TL54 Uimc1-204ENSMUST00000127195 2936 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
Trim43aQ3TL54 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trim43aQ3TL54 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trim43aQ3TL54 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trim43aQ3TL54 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC11.77□□□□□ -0.52
Trim43aQ3TL54 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC11.77□□□□□ -0.52
Trim43aQ3TL54 Med17-201ENSMUST00000034411 3964 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trim43aQ3TL54 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Trim43aQ3TL54 Gm15374-201ENSMUST00000119313 844 ntBASIC11.77□□□□□ -0.53
Trim43aQ3TL54 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
Trim43aQ3TL54 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC11.77□□□□□ -0.53
Trim43aQ3TL54 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.77□□□□□ -0.53
Trim43aQ3TL54 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.77□□□□□ -0.53
Trim43aQ3TL54 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trim43aQ3TL54 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trim43aQ3TL54 Gm18734-201ENSMUST00000172937 808 ntBASIC11.77□□□□□ -0.53
Trim43aQ3TL54 Gm28287-201ENSMUST00000186612 546 ntTSL 5 BASIC11.77□□□□□ -0.53
Trim43aQ3TL54 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Trim43aQ3TL54 AU022133-201ENSMUST00000200601 873 ntBASIC11.77□□□□□ -0.53
Trim43aQ3TL54 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC11.77□□□□□ -0.53
Trim43aQ3TL54 AC154461.3-201ENSMUST00000224831 573 ntBASIC11.77□□□□□ -0.53
Trim43aQ3TL54 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.77□□□□□ -0.53
Trim43aQ3TL54 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim43aQ3TL54 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim43aQ3TL54 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Trim43aQ3TL54 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trim43aQ3TL54 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim43aQ3TL54 Rps24-210ENSMUST00000225023 1613 ntAPPRIS P4 BASIC11.77□□□□□ -0.53
Trim43aQ3TL54 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trim43aQ3TL54 Hottip-201ENSMUST00000141300 2346 ntTSL 2 BASIC11.77□□□□□ -0.53
Trim43aQ3TL54 Arhgap24-203ENSMUST00000094559 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim43aQ3TL54 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trim43aQ3TL54 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trim43aQ3TL54 Sorbs3-203ENSMUST00000227653 3061 ntAPPRIS ALT2 BASIC11.77□□□□□ -0.53
Trim43aQ3TL54 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trim43aQ3TL54 St5-201ENSMUST00000077909 4612 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim43aQ3TL54 Rnf183-203ENSMUST00000107455 1432 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.53
Trim43aQ3TL54 Lman1-201ENSMUST00000048260 3563 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trim43aQ3TL54 Rnf121-203ENSMUST00000106953 2545 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trim43aQ3TL54 Zc3hc1-201ENSMUST00000080812 1824 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim43aQ3TL54 Avil-201ENSMUST00000026500 3033 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim43aQ3TL54 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC11.76□□□□□ -0.53
Trim43aQ3TL54 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
Trim43aQ3TL54 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim43aQ3TL54 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim43aQ3TL54 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trim43aQ3TL54 Inf2-201ENSMUST00000101029 4001 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim43aQ3TL54 Slamf7-204ENSMUST00000194531 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim43aQ3TL54 Gm10463-202ENSMUST00000195772 2889 ntBASIC11.76□□□□□ -0.53
Trim43aQ3TL54 Nln-205ENSMUST00000224945 2486 ntBASIC11.76□□□□□ -0.53
Trim43aQ3TL54 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim43aQ3TL54 Cryz-201ENSMUST00000029850 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trim43aQ3TL54 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC11.76□□□□□ -0.53
Trim43aQ3TL54 Nudt1-205ENSMUST00000110827 744 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trim43aQ3TL54 Gm14740-201ENSMUST00000118538 1150 ntBASIC11.76□□□□□ -0.53
Trim43aQ3TL54 Gm12566-201ENSMUST00000121479 359 ntBASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 39.3 ms