Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gm45218-201ENSMUST00000205533 1678 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf1Q07802 Plscr1-201ENSMUST00000093801 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf1Q07802 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf1Q07802 Fbxo15-201ENSMUST00000037718 1437 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf1Q07802 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf1Q07802 Unc5c-202ENSMUST00000106236 9646 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf1Q07802 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Ebf1Q07802 Rasgrp4-210ENSMUST00000203070 3008 ntTSL 5 BASIC11.32□□□□□ -0.6
Ebf1Q07802 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf1Q07802 Arntl2-202ENSMUST00000111636 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf1Q07802 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf1Q07802 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Ebf1Q07802 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf1Q07802 Prss57-203ENSMUST00000169684 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf1Q07802 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf1Q07802 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf1Q07802 Slc13a5-206ENSMUST00000208912 1751 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Ebf1Q07802 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC11.31□□□□□ -0.6
Ebf1Q07802 Mob1a-201ENSMUST00000038658 4119 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf1Q07802 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf1Q07802 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf1Q07802 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf1Q07802 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf1Q07802 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf1Q07802 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf1Q07802 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf1Q07802 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf1Q07802 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
Ebf1Q07802 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf1Q07802 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf1Q07802 Gm25148-201ENSMUST00000104611 123 ntBASIC11.31□□□□□ -0.6
Ebf1Q07802 Gm11996-201ENSMUST00000117538 915 ntBASIC11.31□□□□□ -0.6
Ebf1Q07802 Gm11700-201ENSMUST00000119409 403 ntBASIC11.31□□□□□ -0.6
Ebf1Q07802 Gm13019-201ENSMUST00000120000 276 ntBASIC11.31□□□□□ -0.6
Ebf1Q07802 Gm15197-201ENSMUST00000120526 478 ntBASIC11.31□□□□□ -0.6
Ebf1Q07802 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC11.31□□□□□ -0.6
Ebf1Q07802 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ebf1Q07802 Gm16167-201ENSMUST00000160428 1065 ntBASIC11.31□□□□□ -0.6
Ebf1Q07802 E030018B13Rik-201ENSMUST00000177638 1015 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf1Q07802 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf1Q07802 Gm9916-201ENSMUST00000192943 1228 ntBASIC11.31□□□□□ -0.6
Ebf1Q07802 Chn2-210ENSMUST00000203091 755 ntTSL 5 BASIC11.31□□□□□ -0.6
Ebf1Q07802 Nicn1-201ENSMUST00000035227 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf1Q07802 1600002K03Rik-201ENSMUST00000041882 678 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf1Q07802 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf1Q07802 Gm8181-201ENSMUST00000062242 669 ntBASIC11.31□□□□□ -0.6
Ebf1Q07802 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf1Q07802 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf1Q07802 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Ebf1Q07802 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf1Q07802 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf1Q07802 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf1Q07802 Nmrk1-203ENSMUST00000159572 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf1Q07802 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ebf1Q07802 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf1Q07802 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
Ebf1Q07802 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf1Q07802 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf1Q07802 Psmd12-202ENSMUST00000106750 1311 ntTSL 5 BASIC11.31□□□□□ -0.6
Ebf1Q07802 Lmo3-206ENSMUST00000163024 1331 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf1Q07802 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Ebf1Q07802 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf1Q07802 Ces3b-201ENSMUST00000074403 1907 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf1Q07802 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Ebf1Q07802 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Ebf1Q07802 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Ebf1Q07802 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf1Q07802 Pfkfb3-220ENSMUST00000192949 4801 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf1Q07802 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf1Q07802 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf1Q07802 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC11.3□□□□□ -0.6
Ebf1Q07802 Gm18210-201ENSMUST00000209001 1524 ntBASIC11.3□□□□□ -0.6
Ebf1Q07802 Bmp5-201ENSMUST00000012281 3822 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf1Q07802 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.3□□□□□ -0.6
Ebf1Q07802 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf1Q07802 Sgk1-203ENSMUST00000100036 2476 ntTSL 5 BASIC11.3□□□□□ -0.6
Ebf1Q07802 Sgk1-201ENSMUST00000020145 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf1Q07802 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ebf1Q07802 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ebf1Q07802 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf1Q07802 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Ebf1Q07802 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC11.3□□□□□ -0.6
Ebf1Q07802 Arhgap35-202ENSMUST00000171937 6251 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ebf1Q07802 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC11.3□□□□□ -0.6
Ebf1Q07802 Arih1-202ENSMUST00000165322 1431 ntTSL 5 BASIC11.3□□□□□ -0.6
Ebf1Q07802 Lrriq1-203ENSMUST00000166240 5232 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Ebf1Q07802 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf1Q07802 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf1Q07802 Gm6158-201ENSMUST00000109467 904 ntBASIC11.3□□□□□ -0.6
Ebf1Q07802 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf1Q07802 Gm15620-201ENSMUST00000122949 270 ntBASIC11.3□□□□□ -0.6
Ebf1Q07802 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf1Q07802 Gm14718-201ENSMUST00000138082 752 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf1Q07802 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Ebf1Q07802 AU020206-201ENSMUST00000181224 656 ntTSL 2 BASIC11.3□□□□□ -0.6
Ebf1Q07802 Gm18801-201ENSMUST00000186616 536 ntBASIC11.3□□□□□ -0.6
Ebf1Q07802 Gm42430-201ENSMUST00000197209 616 ntBASIC11.3□□□□□ -0.6
Ebf1Q07802 Gm29763-201ENSMUST00000205306 616 ntBASIC11.3□□□□□ -0.6
Ebf1Q07802 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC11.3□□□□□ -0.6
Ebf1Q07802 Gm2594-201ENSMUST00000214774 742 ntBASIC11.3□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms