Protein–RNA interactions for Protein: P97496

Smarcc1, SWI/SNF complex subunit SMARCC1, mousemouse

Predictions only

Length 1,104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1P97496 Olfr707-203ENSMUST00000210644 1817 ntAPPRIS P1 TSL 3 BASIC13.95□□□□□ -0.18
Smarcc1P97496 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Smarcc1P97496 Gm43051-201ENSMUST00000201096 2678 ntBASIC13.95□□□□□ -0.18
Smarcc1P97496 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcc1P97496 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcc1P97496 Ptbp1-206ENSMUST00000165704 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcc1P97496 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcc1P97496 AC137950.2-202ENSMUST00000227150 1635 ntBASIC13.95□□□□□ -0.18
Smarcc1P97496 Ccl19-ps1-201ENSMUST00000119621 327 ntBASIC13.95□□□□□ -0.18
Smarcc1P97496 Hoxd3os1-203ENSMUST00000145799 511 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcc1P97496 Gm12676-201ENSMUST00000149078 808 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcc1P97496 Pitpnm2os2-201ENSMUST00000159053 828 ntTSL 2 BASIC13.95□□□□□ -0.18
Smarcc1P97496 Gm20441-201ENSMUST00000173512 756 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Smarcc1P97496 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC13.95□□□□□ -0.18
Smarcc1P97496 Mrgprb7-ps-201ENSMUST00000190238 964 ntBASIC13.95□□□□□ -0.18
Smarcc1P97496 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcc1P97496 Myo1h-206ENSMUST00000196467 1208 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcc1P97496 Gm30055-201ENSMUST00000203175 803 ntBASIC13.95□□□□□ -0.18
Smarcc1P97496 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Smarcc1P97496 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Smarcc1P97496 Kcna10-201ENSMUST00000055064 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcc1P97496 Cchcr1-205ENSMUST00000173903 3054 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Smarcc1P97496 Myh6-205ENSMUST00000226297 6008 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Smarcc1P97496 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcc1P97496 Ccdc136-201ENSMUST00000096084 3826 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Smarcc1P97496 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcc1P97496 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcc1P97496 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcc1P97496 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcc1P97496 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcc1P97496 Fhitos-201ENSMUST00000160149 1511 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Smarcc1P97496 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC13.95□□□□□ -0.18
Smarcc1P97496 Camta2-202ENSMUST00000100933 4383 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Smarcc1P97496 Camta2-204ENSMUST00000108545 4377 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcc1P97496 Camta2-206ENSMUST00000120261 4398 ntTSL 5 BASIC13.94□□□□□ -0.18
Smarcc1P97496 1700047I17Rik2-201ENSMUST00000177978 3863 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcc1P97496 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcc1P97496 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcc1P97496 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcc1P97496 Trim35-201ENSMUST00000022623 3678 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcc1P97496 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcc1P97496 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC13.94□□□□□ -0.18
Smarcc1P97496 Slc6a4-201ENSMUST00000021195 2725 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcc1P97496 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcc1P97496 Tubd1-201ENSMUST00000020821 2070 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcc1P97496 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcc1P97496 Skint7-202ENSMUST00000106568 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcc1P97496 Gm13700-201ENSMUST00000118624 1128 ntBASIC13.94□□□□□ -0.18
Smarcc1P97496 Gm15815-201ENSMUST00000120569 255 ntBASIC13.94□□□□□ -0.18
Smarcc1P97496 4930533B01Rik-201ENSMUST00000123377 1029 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcc1P97496 Gm16288-201ENSMUST00000137940 367 ntBASIC13.94□□□□□ -0.18
Smarcc1P97496 Atad3aos-202ENSMUST00000150777 650 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcc1P97496 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcc1P97496 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcc1P97496 Gm5739-201ENSMUST00000208601 1703 ntBASIC13.94□□□□□ -0.18
Smarcc1P97496 AC166361.2-201ENSMUST00000219269 1415 ntBASIC13.94□□□□□ -0.18
Smarcc1P97496 AC187103.3-201ENSMUST00000225725 646 ntBASIC13.94□□□□□ -0.18
Smarcc1P97496 Cmtm6-201ENSMUST00000035007 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcc1P97496 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcc1P97496 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcc1P97496 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcc1P97496 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcc1P97496 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcc1P97496 Zscan21-201ENSMUST00000062350 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcc1P97496 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcc1P97496 4931406C07Rik-202ENSMUST00000178977 2650 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcc1P97496 CT573086.2-201ENSMUST00000227277 4992 ntBASIC13.94□□□□□ -0.18
Smarcc1P97496 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcc1P97496 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcc1P97496 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smarcc1P97496 Pacsin1-201ENSMUST00000045896 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcc1P97496 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Smarcc1P97496 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcc1P97496 Gm42858-201ENSMUST00000202512 1704 ntBASIC13.93□□□□□ -0.18
Smarcc1P97496 Grk4-202ENSMUST00000074651 3234 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcc1P97496 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC13.93□□□□□ -0.18
Smarcc1P97496 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Smarcc1P97496 1110051M20Rik-203ENSMUST00000102594 1977 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcc1P97496 Nupl1-206ENSMUST00000225111 2936 ntBASIC13.93□□□□□ -0.18
Smarcc1P97496 Mbtps2-203ENSMUST00000112522 3891 ntTSL 2 BASIC13.93□□□□□ -0.18
Smarcc1P97496 Mbtps2-208ENSMUST00000179062 3890 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Smarcc1P97496 Gm15965-201ENSMUST00000123318 1428 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcc1P97496 Sh3gl2-202ENSMUST00000107184 671 ntTSL 2 BASIC13.93□□□□□ -0.18
Smarcc1P97496 Gm12028-201ENSMUST00000118065 436 ntBASIC13.93□□□□□ -0.18
Smarcc1P97496 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcc1P97496 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcc1P97496 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcc1P97496 Gm7928-201ENSMUST00000181249 701 ntBASIC13.93□□□□□ -0.18
Smarcc1P97496 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC13.93□□□□□ -0.18
Smarcc1P97496 Gm37851-201ENSMUST00000193871 889 ntBASIC13.93□□□□□ -0.18
Smarcc1P97496 AC134537.1-201ENSMUST00000219205 265 ntBASIC13.93□□□□□ -0.18
Smarcc1P97496 AC154436.1-201ENSMUST00000227272 782 ntBASIC13.93□□□□□ -0.18
Smarcc1P97496 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcc1P97496 Ttc24-202ENSMUST00000064550 671 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcc1P97496 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcc1P97496 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcc1P97496 Bpifb1-202ENSMUST00000081816 1699 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smarcc1P97496 Glb1l-201ENSMUST00000113623 2339 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Smarcc1P97496 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.93□□□□□ -0.18
Smarcc1P97496 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms