Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SgcaP82350 Trpm1-221ENSMUST00000206706 2350 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SgcaP82350 Bcl2l11-205ENSMUST00000110341 5036 ntAPPRIS P4 TSL 1 (best) BASIC9.32□□□□□ -0.92
SgcaP82350 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SgcaP82350 Rdh9-201ENSMUST00000052652 2698 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SgcaP82350 Ehmt1-202ENSMUST00000091348 4615 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
SgcaP82350 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
SgcaP82350 Armc8-202ENSMUST00000185524 2820 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
SgcaP82350 Rerg-201ENSMUST00000032347 2075 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
SgcaP82350 Helz-201ENSMUST00000075012 6218 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
SgcaP82350 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
SgcaP82350 Gm20646-201ENSMUST00000176807 1316 ntTSL 3 BASIC9.31□□□□□ -0.92
SgcaP82350 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
SgcaP82350 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC9.31□□□□□ -0.92
SgcaP82350 Dpm2-203ENSMUST00000140592 1412 ntTSL 5 BASIC9.31□□□□□ -0.92
SgcaP82350 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SgcaP82350 Adcy4-201ENSMUST00000002398 3444 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SgcaP82350 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC9.31□□□□□ -0.92
SgcaP82350 Anxa11-202ENSMUST00000112364 1625 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
SgcaP82350 Serpinb6b-203ENSMUST00000164541 1719 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
SgcaP82350 Tfdp1-201ENSMUST00000170909 1700 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
SgcaP82350 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SgcaP82350 Habp2-201ENSMUST00000078284 2314 ntAPPRIS ALT2 TSL 5 BASIC9.31□□□□□ -0.92
SgcaP82350 AU041133-202ENSMUST00000201286 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SgcaP82350 Smarca1-202ENSMUST00000088973 4798 ntAPPRIS P3 TSL 1 (best) BASIC9.31□□□□□ -0.92
SgcaP82350 Gm43372-201ENSMUST00000202662 3016 ntBASIC9.31□□□□□ -0.92
SgcaP82350 Txn2-202ENSMUST00000100486 676 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
SgcaP82350 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SgcaP82350 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
SgcaP82350 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC9.31□□□□□ -0.92
SgcaP82350 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SgcaP82350 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
SgcaP82350 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
SgcaP82350 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
SgcaP82350 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC9.31□□□□□ -0.92
SgcaP82350 Gm26956-201ENSMUST00000182176 986 ntBASIC9.31□□□□□ -0.92
SgcaP82350 Mir8093-201ENSMUST00000185043 137 ntBASIC9.31□□□□□ -0.92
SgcaP82350 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC9.31□□□□□ -0.92
SgcaP82350 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC9.31□□□□□ -0.92
SgcaP82350 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC9.31□□□□□ -0.92
SgcaP82350 Gm44008-201ENSMUST00000204345 412 ntBASIC9.31□□□□□ -0.92
SgcaP82350 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC9.31□□□□□ -0.92
SgcaP82350 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
SgcaP82350 Gm5455-201ENSMUST00000058710 715 ntBASIC9.31□□□□□ -0.92
SgcaP82350 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
SgcaP82350 Map7d2-202ENSMUST00000112470 1350 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
SgcaP82350 Gm6831-202ENSMUST00000213025 1673 ntBASIC9.31□□□□□ -0.92
SgcaP82350 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SgcaP82350 A630012P03Rik-202ENSMUST00000114854 1974 ntTSL 5 BASIC9.31□□□□□ -0.92
SgcaP82350 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
SgcaP82350 Tomt-201ENSMUST00000106969 2796 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SgcaP82350 Plec-215ENSMUST00000169108 14853 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
SgcaP82350 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SgcaP82350 Polr3b-201ENSMUST00000077175 4975 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SgcaP82350 Olfr130-202ENSMUST00000215726 5810 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
SgcaP82350 Dnmt1-202ENSMUST00000177754 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC9.31□□□□□ -0.92
SgcaP82350 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SgcaP82350 Gm9220-201ENSMUST00000190721 2544 ntBASIC9.31□□□□□ -0.92
SgcaP82350 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SgcaP82350 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SgcaP82350 Ccr6-203ENSMUST00000166348 1310 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
SgcaP82350 Gtf2ird1-206ENSMUST00000111244 3461 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
SgcaP82350 Rnf2-201ENSMUST00000076110 3160 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SgcaP82350 Olfr1219-204ENSMUST00000215225 5865 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
SgcaP82350 Gm38054-201ENSMUST00000192380 2167 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
SgcaP82350 Lasp1-201ENSMUST00000043843 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SgcaP82350 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
SgcaP82350 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC9.3□□□□□ -0.92
SgcaP82350 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
SgcaP82350 D630003M21Rik-202ENSMUST00000103121 4521 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
SgcaP82350 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC9.3□□□□□ -0.92
SgcaP82350 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SgcaP82350 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
SgcaP82350 Dpf2-202ENSMUST00000118623 2406 ntTSL 5 BASIC9.3□□□□□ -0.92
SgcaP82350 Fam13c-201ENSMUST00000062883 3262 ntAPPRIS P3 TSL 1 (best) BASIC9.3□□□□□ -0.92
SgcaP82350 Gm3756-201ENSMUST00000169182 1355 ntBASIC9.3□□□□□ -0.92
SgcaP82350 Gm45416-201ENSMUST00000209713 2201 ntBASIC9.3□□□□□ -0.92
SgcaP82350 Gm11595-201ENSMUST00000107440 1200 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
SgcaP82350 Dcun1d2-202ENSMUST00000110838 2955 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
SgcaP82350 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC9.3□□□□□ -0.92
SgcaP82350 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
SgcaP82350 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
SgcaP82350 Snora78-201ENSMUST00000158630 128 ntBASIC9.3□□□□□ -0.92
SgcaP82350 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC9.3□□□□□ -0.92
SgcaP82350 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SgcaP82350 Zfp872-202ENSMUST00000178901 2958 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SgcaP82350 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
SgcaP82350 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC9.3□□□□□ -0.92
SgcaP82350 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
SgcaP82350 Mllt11-204ENSMUST00000198948 793 ntAPPRIS P1 TSL 3 BASIC9.3□□□□□ -0.92
SgcaP82350 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SgcaP82350 Gm8712-201ENSMUST00000221090 701 ntBASIC9.3□□□□□ -0.92
SgcaP82350 CT009486.1-201ENSMUST00000222047 661 ntTSL 3 BASIC9.3□□□□□ -0.92
SgcaP82350 AC134869.4-202ENSMUST00000224350 837 ntBASIC9.3□□□□□ -0.92
SgcaP82350 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
SgcaP82350 Olfr368-201ENSMUST00000053990 985 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
SgcaP82350 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
SgcaP82350 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
SgcaP82350 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
SgcaP82350 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms