Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC10□□□□□ -0.81
SgcbP82349 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC10□□□□□ -0.81
SgcbP82349 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC10□□□□□ -0.81
SgcbP82349 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC10□□□□□ -0.81
SgcbP82349 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC10□□□□□ -0.81
SgcbP82349 Gm29787-201ENSMUST00000222129 849 ntBASIC10□□□□□ -0.81
SgcbP82349 AC154848.1-201ENSMUST00000225451 846 ntBASIC10□□□□□ -0.81
SgcbP82349 Pgpep1l-201ENSMUST00000032770 953 ntTSL 1 (best) BASIC10□□□□□ -0.81
SgcbP82349 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
SgcbP82349 Prm3-201ENSMUST00000050864 410 ntAPPRIS P1 BASIC10□□□□□ -0.81
SgcbP82349 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC10□□□□□ -0.81
SgcbP82349 Gm10020-201ENSMUST00000081993 612 ntBASIC10□□□□□ -0.81
SgcbP82349 Krtap6-2-201ENSMUST00000082065 786 ntAPPRIS P1 BASIC10□□□□□ -0.81
SgcbP82349 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10□□□□□ -0.81
SgcbP82349 Gm10750-201ENSMUST00000099266 1506 ntAPPRIS P1 BASIC10□□□□□ -0.81
SgcbP82349 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SgcbP82349 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
SgcbP82349 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10□□□□□ -0.81
SgcbP82349 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SgcbP82349 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SgcbP82349 Vsx2-201ENSMUST00000021665 3270 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SgcbP82349 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC10□□□□□ -0.81
SgcbP82349 AC126257.2-201ENSMUST00000215507 2300 ntBASIC10□□□□□ -0.81
SgcbP82349 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC10□□□□□ -0.81
SgcbP82349 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
SgcbP82349 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SgcbP82349 Gm43984-201ENSMUST00000204572 2864 ntBASIC10□□□□□ -0.81
SgcbP82349 Gm4900-201ENSMUST00000222046 1628 ntBASIC10□□□□□ -0.81
SgcbP82349 C2-201ENSMUST00000025230 2641 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
SgcbP82349 Gm7964-201ENSMUST00000051522 1378 ntBASIC10□□□□□ -0.81
SgcbP82349 Dchs1-201ENSMUST00000078482 10754 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
SgcbP82349 Gm37160-201ENSMUST00000193081 1689 ntBASIC9.99□□□□□ -0.81
SgcbP82349 Trp73-205ENSMUST00000133533 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
SgcbP82349 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC9.99□□□□□ -0.81
SgcbP82349 2610005L07Rik-202ENSMUST00000140111 4009 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
SgcbP82349 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
SgcbP82349 Gm9544-201ENSMUST00000223349 2482 ntBASIC9.99□□□□□ -0.81
SgcbP82349 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
SgcbP82349 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
SgcbP82349 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
SgcbP82349 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
SgcbP82349 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC9.99□□□□□ -0.81
SgcbP82349 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
SgcbP82349 Kctd10-202ENSMUST00000102581 3103 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
SgcbP82349 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
SgcbP82349 Gm18806-201ENSMUST00000207607 1775 ntBASIC9.99□□□□□ -0.81
SgcbP82349 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC9.99□□□□□ -0.81
SgcbP82349 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
SgcbP82349 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
SgcbP82349 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
SgcbP82349 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
SgcbP82349 Ighv5-9-201ENSMUST00000103448 418 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
SgcbP82349 Gm25148-201ENSMUST00000104611 123 ntBASIC9.99□□□□□ -0.81
SgcbP82349 A230006K03Rik-201ENSMUST00000107533 977 ntTSL 5 BASIC9.99□□□□□ -0.81
SgcbP82349 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
SgcbP82349 Gm12856-201ENSMUST00000119471 1293 ntBASIC9.99□□□□□ -0.81
SgcbP82349 Csf1-204ENSMUST00000120654 821 ntTSL 3 BASIC9.99□□□□□ -0.81
SgcbP82349 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
SgcbP82349 Gm24992-201ENSMUST00000157412 130 ntBASIC9.99□□□□□ -0.81
SgcbP82349 Gm22138-201ENSMUST00000158748 128 ntBASIC9.99□□□□□ -0.81
SgcbP82349 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC9.99□□□□□ -0.81
SgcbP82349 Gm29040-201ENSMUST00000189899 1188 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
SgcbP82349 Gm40263-201ENSMUST00000197468 580 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
SgcbP82349 Gm44329-201ENSMUST00000197469 112 ntBASIC9.99□□□□□ -0.81
SgcbP82349 Gm43058-201ENSMUST00000197645 625 ntBASIC9.99□□□□□ -0.81
SgcbP82349 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC9.99□□□□□ -0.81
SgcbP82349 Gm42867-201ENSMUST00000202995 469 ntBASIC9.99□□□□□ -0.81
SgcbP82349 Mt1-202ENSMUST00000211807 1085 ntBASIC9.99□□□□□ -0.81
SgcbP82349 AC160929.1-201ENSMUST00000221247 415 ntBASIC9.99□□□□□ -0.81
SgcbP82349 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
SgcbP82349 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
SgcbP82349 Vmn1r8-201ENSMUST00000078186 1213 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
SgcbP82349 Specc1l-204ENSMUST00000218766 4725 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
SgcbP82349 Myt1l-201ENSMUST00000021009 5027 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
SgcbP82349 Srcap-201ENSMUST00000066582 4545 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
SgcbP82349 Gm43127-201ENSMUST00000195890 2789 ntBASIC9.99□□□□□ -0.81
SgcbP82349 Zdbf2-201ENSMUST00000029025 12112 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
SgcbP82349 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
SgcbP82349 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
SgcbP82349 Rassf4-201ENSMUST00000035842 6460 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
SgcbP82349 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC9.99□□□□□ -0.81
SgcbP82349 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
SgcbP82349 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
SgcbP82349 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
SgcbP82349 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
SgcbP82349 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
SgcbP82349 AC169511.2-201ENSMUST00000226674 2063 ntBASIC9.98□□□□□ -0.81
SgcbP82349 Atp11c-201ENSMUST00000033480 5939 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
SgcbP82349 Ep400-202ENSMUST00000112433 3399 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
SgcbP82349 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
SgcbP82349 Dopey2-201ENSMUST00000045004 7319 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SgcbP82349 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
SgcbP82349 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SgcbP82349 Uaca-201ENSMUST00000050183 4428 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
SgcbP82349 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SgcbP82349 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC9.98□□□□□ -0.81
SgcbP82349 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
SgcbP82349 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SgcbP82349 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
SgcbP82349 Gm45776-201ENSMUST00000212366 1522 ntBASIC9.98□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 52.3 ms