Protein–RNA interactions for Protein: P59016

Vps33b, Vacuolar protein sorting-associated protein 33B, mousemouse

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33bP59016 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps33bP59016 Pros1-201ENSMUST00000023629 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps33bP59016 Rps6-201ENSMUST00000102814 878 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps33bP59016 Gm3404-201ENSMUST00000110596 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps33bP59016 Gm7781-201ENSMUST00000117258 788 ntBASIC13.93□□□□□ -0.18
Vps33bP59016 Gm12463-201ENSMUST00000118271 849 ntBASIC13.93□□□□□ -0.18
Vps33bP59016 Gm8864-201ENSMUST00000118653 1010 ntBASIC13.93□□□□□ -0.18
Vps33bP59016 Tsc22d3-204ENSMUST00000123898 952 ntTSL 5 BASIC13.93□□□□□ -0.18
Vps33bP59016 Gm6425-201ENSMUST00000136332 790 ntBASIC13.93□□□□□ -0.18
Vps33bP59016 Gm13393-201ENSMUST00000141935 396 ntTSL 5 BASIC13.93□□□□□ -0.18
Vps33bP59016 Gm16235-202ENSMUST00000149562 206 ntTSL 3 BASIC13.93□□□□□ -0.18
Vps33bP59016 Gm24074-201ENSMUST00000158178 260 ntBASIC13.93□□□□□ -0.18
Vps33bP59016 Gm23479-201ENSMUST00000158876 122 ntBASIC13.93□□□□□ -0.18
Vps33bP59016 Gast-201ENSMUST00000017309 460 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps33bP59016 Mir6396-201ENSMUST00000183603 111 ntBASIC13.93□□□□□ -0.18
Vps33bP59016 Gm29593-201ENSMUST00000189827 620 ntTSL 5 BASIC13.93□□□□□ -0.18
Vps33bP59016 Gm33969-201ENSMUST00000197615 388 ntTSL 3 BASIC13.93□□□□□ -0.18
Vps33bP59016 Ascl3-201ENSMUST00000035372 700 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps33bP59016 Rpl37-201ENSMUST00000045356 835 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps33bP59016 Speer2-201ENSMUST00000076500 1118 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Vps33bP59016 Slc6a12-209ENSMUST00000171008 1674 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Vps33bP59016 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Vps33bP59016 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps33bP59016 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps33bP59016 Gad1-ps-201ENSMUST00000167243 1776 ntBASIC13.93□□□□□ -0.18
Vps33bP59016 Gm18806-201ENSMUST00000207607 1775 ntBASIC13.93□□□□□ -0.18
Vps33bP59016 Rnf223-201ENSMUST00000209248 2908 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Vps33bP59016 Gm43127-201ENSMUST00000195890 2789 ntBASIC13.93□□□□□ -0.18
Vps33bP59016 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Vps33bP59016 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.93□□□□□ -0.18
Vps33bP59016 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC13.93□□□□□ -0.18
Vps33bP59016 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC13.93□□□□□ -0.18
Vps33bP59016 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps33bP59016 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps33bP59016 Gm42943-201ENSMUST00000199676 3242 ntBASIC13.92□□□□□ -0.18
Vps33bP59016 Gm38034-201ENSMUST00000193915 2069 ntBASIC13.92□□□□□ -0.18
Vps33bP59016 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps33bP59016 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps33bP59016 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps33bP59016 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps33bP59016 Plac9b-201ENSMUST00000100809 388 ntTSL 2 BASIC13.92□□□□□ -0.18
Vps33bP59016 Capns1-202ENSMUST00000108196 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps33bP59016 Gm11929-201ENSMUST00000118175 945 ntBASIC13.92□□□□□ -0.18
Vps33bP59016 Gm15132-201ENSMUST00000118581 652 ntBASIC13.92□□□□□ -0.18
Vps33bP59016 Gm15489-201ENSMUST00000132811 973 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vps33bP59016 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vps33bP59016 Gm13780-201ENSMUST00000150482 1187 ntTSL 5 BASIC13.92□□□□□ -0.18
Vps33bP59016 Vmn2r-ps13-201ENSMUST00000176920 606 ntBASIC13.92□□□□□ -0.18
Vps33bP59016 Gm27168-201ENSMUST00000183394 361 ntTSL 3 BASIC13.92□□□□□ -0.18
Vps33bP59016 Gm42375-201ENSMUST00000206226 745 ntTSL 5 BASIC13.92□□□□□ -0.18
Vps33bP59016 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps33bP59016 Gm9790-201ENSMUST00000054148 288 ntBASIC13.92□□□□□ -0.18
Vps33bP59016 Gm9869-201ENSMUST00000063858 375 ntTSL 5 BASIC13.92□□□□□ -0.18
Vps33bP59016 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Vps33bP59016 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Vps33bP59016 Hormad2-202ENSMUST00000109948 1969 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Vps33bP59016 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps33bP59016 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vps33bP59016 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vps33bP59016 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps33bP59016 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Vps33bP59016 Plscr1-202ENSMUST00000186364 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps33bP59016 Dph5-202ENSMUST00000106505 1836 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Vps33bP59016 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Vps33bP59016 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC13.92□□□□□ -0.18
Vps33bP59016 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC13.91□□□□□ -0.18
Vps33bP59016 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC13.91□□□□□ -0.18
Vps33bP59016 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Vps33bP59016 Gm44663-201ENSMUST00000206898 3150 ntBASIC13.91□□□□□ -0.18
Vps33bP59016 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC13.91□□□□□ -0.18
Vps33bP59016 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Vps33bP59016 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps33bP59016 Hectd2os-203ENSMUST00000142067 2662 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps33bP59016 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps33bP59016 Mamdc4-202ENSMUST00000114223 3998 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Vps33bP59016 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps33bP59016 Snrnp27-201ENSMUST00000001186 885 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps33bP59016 Ttc39b-206ENSMUST00000148811 727 ntTSL 3 BASIC13.91□□□□□ -0.18
Vps33bP59016 Sectm1b-206ENSMUST00000168459 1075 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps33bP59016 Gm22876-201ENSMUST00000175450 298 ntBASIC13.91□□□□□ -0.18
Vps33bP59016 2310009A05Rik-201ENSMUST00000184126 496 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps33bP59016 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC13.91□□□□□ -0.18
Vps33bP59016 Gm42710-201ENSMUST00000200608 985 ntBASIC13.91□□□□□ -0.18
Vps33bP59016 Gm43450-201ENSMUST00000202611 632 ntTSL 3 BASIC13.91□□□□□ -0.18
Vps33bP59016 1700018G05Rik-201ENSMUST00000211116 386 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps33bP59016 Gm18122-201ENSMUST00000211390 904 ntBASIC13.91□□□□□ -0.18
Vps33bP59016 Gm19605-205ENSMUST00000221712 677 ntTSL 3 BASIC13.91□□□□□ -0.18
Vps33bP59016 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Vps33bP59016 Dusp6-204ENSMUST00000220291 2359 ntTSL 5 BASIC13.91□□□□□ -0.18
Vps33bP59016 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps33bP59016 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Vps33bP59016 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps33bP59016 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps33bP59016 Iyd-201ENSMUST00000019896 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps33bP59016 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps33bP59016 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Vps33bP59016 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Vps33bP59016 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.9□□□□□ -0.18
Vps33bP59016 Trim9-209ENSMUST00000222316 3049 ntTSL 2 BASIC13.9□□□□□ -0.18
Vps33bP59016 Rack1-201ENSMUST00000020640 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms