Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VhlP40338 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VhlP40338 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
VhlP40338 Snord17-201ENSMUST00000104526 238 ntBASIC9.12□□□□□ -0.95
VhlP40338 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC9.12□□□□□ -0.95
VhlP40338 Gm12247-201ENSMUST00000117585 670 ntBASIC9.12□□□□□ -0.95
VhlP40338 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
VhlP40338 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC9.12□□□□□ -0.95
VhlP40338 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC9.12□□□□□ -0.95
VhlP40338 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
VhlP40338 Lmo3-202ENSMUST00000161450 1048 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
VhlP40338 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC9.12□□□□□ -0.95
VhlP40338 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
VhlP40338 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC9.12□□□□□ -0.95
VhlP40338 AA914427-201ENSMUST00000193194 1166 ntBASIC9.12□□□□□ -0.95
VhlP40338 Gm43058-201ENSMUST00000197645 625 ntBASIC9.12□□□□□ -0.95
VhlP40338 Gm7783-201ENSMUST00000204795 781 ntBASIC9.12□□□□□ -0.95
VhlP40338 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
VhlP40338 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC9.12□□□□□ -0.95
VhlP40338 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
VhlP40338 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC9.12□□□□□ -0.95
VhlP40338 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
VhlP40338 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
VhlP40338 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VhlP40338 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VhlP40338 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VhlP40338 Ttll13-201ENSMUST00000058266 3010 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
VhlP40338 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VhlP40338 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
VhlP40338 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
VhlP40338 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC9.11□□□□□ -0.95
VhlP40338 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
VhlP40338 Ncam1-203ENSMUST00000192584 2525 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VhlP40338 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VhlP40338 Gm7742-201ENSMUST00000167648 1527 ntBASIC9.11□□□□□ -0.95
VhlP40338 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC9.11□□□□□ -0.95
VhlP40338 Gm7732-201ENSMUST00000170486 1527 ntBASIC9.11□□□□□ -0.95
VhlP40338 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC9.11□□□□□ -0.95
VhlP40338 Gm7740-201ENSMUST00000186171 1527 ntBASIC9.11□□□□□ -0.95
VhlP40338 Gm7736-201ENSMUST00000096981 1527 ntBASIC9.11□□□□□ -0.95
VhlP40338 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
VhlP40338 Pex19-202ENSMUST00000111252 2844 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VhlP40338 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
VhlP40338 Tgfbrap1-201ENSMUST00000095014 5607 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
VhlP40338 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
VhlP40338 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
VhlP40338 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
VhlP40338 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VhlP40338 Drd3-201ENSMUST00000023390 1455 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
VhlP40338 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VhlP40338 1700030K09Rik-202ENSMUST00000121902 2373 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
VhlP40338 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VhlP40338 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC9.11□□□□□ -0.95
VhlP40338 Gm23596-201ENSMUST00000104304 132 ntBASIC9.11□□□□□ -0.95
VhlP40338 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC9.11□□□□□ -0.95
VhlP40338 Gm14724-201ENSMUST00000118400 537 ntBASIC9.11□□□□□ -0.95
VhlP40338 Gm8566-201ENSMUST00000120174 465 ntBASIC9.11□□□□□ -0.95
VhlP40338 Gm13350-201ENSMUST00000120519 479 ntBASIC9.11□□□□□ -0.95
VhlP40338 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC9.11□□□□□ -0.95
VhlP40338 Gm24990-201ENSMUST00000157406 323 ntBASIC9.11□□□□□ -0.95
VhlP40338 Gm20482-202ENSMUST00000174729 825 ntBASIC9.11□□□□□ -0.95
VhlP40338 Gm7584-201ENSMUST00000175829 940 ntBASIC9.11□□□□□ -0.95
VhlP40338 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VhlP40338 Gm16505-201ENSMUST00000179981 232 ntBASIC9.11□□□□□ -0.95
VhlP40338 Gm27320-201ENSMUST00000184892 109 ntBASIC9.11□□□□□ -0.95
VhlP40338 Gm28071-201ENSMUST00000190355 478 ntBASIC9.11□□□□□ -0.95
VhlP40338 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VhlP40338 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
VhlP40338 Gm8342-201ENSMUST00000209839 757 ntBASIC9.11□□□□□ -0.95
VhlP40338 Gm45575-201ENSMUST00000210283 548 ntBASIC9.11□□□□□ -0.95
VhlP40338 Cmtm2a-203ENSMUST00000212492 635 ntAPPRIS ALT2 TSL 3 BASIC9.11□□□□□ -0.95
VhlP40338 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC9.11□□□□□ -0.95
VhlP40338 Hspb2-202ENSMUST00000217159 552 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VhlP40338 AC151275.1-201ENSMUST00000224870 585 ntBASIC9.11□□□□□ -0.95
VhlP40338 Olfr889-201ENSMUST00000072290 945 ntTSL 5 BASIC9.11□□□□□ -0.95
VhlP40338 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
VhlP40338 Ube2c-201ENSMUST00000001439 2191 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VhlP40338 Nampt-201ENSMUST00000020886 4527 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
VhlP40338 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
VhlP40338 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
VhlP40338 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VhlP40338 Flcn-203ENSMUST00000102697 3437 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
VhlP40338 Arhgap24-205ENSMUST00000112853 2853 ntTSL 5 BASIC9.11□□□□□ -0.95
VhlP40338 Gm13910-201ENSMUST00000121752 1428 ntBASIC9.11□□□□□ -0.95
VhlP40338 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
VhlP40338 Oprm1-204ENSMUST00000063036 1427 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VhlP40338 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
VhlP40338 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
VhlP40338 Esr2-202ENSMUST00000101291 3362 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VhlP40338 Gm5380-201ENSMUST00000119296 2136 ntBASIC9.11□□□□□ -0.95
VhlP40338 Ifih1-201ENSMUST00000028259 5470 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
VhlP40338 Tnk2-207ENSMUST00000115126 4358 ntTSL 5 BASIC9.11□□□□□ -0.95
VhlP40338 Gm6015-201ENSMUST00000217493 1586 ntBASIC9.11□□□□□ -0.95
VhlP40338 Raver1-201ENSMUST00000115487 3470 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
VhlP40338 Gm35507-201ENSMUST00000197932 2761 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
VhlP40338 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
VhlP40338 Gadl1-202ENSMUST00000119291 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
VhlP40338 4933425D22Rik-201ENSMUST00000201035 1721 ntBASIC9.11□□□□□ -0.95
VhlP40338 Lpo-201ENSMUST00000103177 2926 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
VhlP40338 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms