Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vcam1P29533 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC12.75□□□□□ -0.37
Vcam1P29533 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vcam1P29533 Gm6606-201ENSMUST00000193613 947 ntBASIC12.75□□□□□ -0.37
Vcam1P29533 Gm43097-201ENSMUST00000196867 151 ntBASIC12.75□□□□□ -0.37
Vcam1P29533 Cdk5-203ENSMUST00000198990 783 ntTSL 5 BASIC12.75□□□□□ -0.37
Vcam1P29533 Gm6439-201ENSMUST00000199849 862 ntBASIC12.75□□□□□ -0.37
Vcam1P29533 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC12.75□□□□□ -0.37
Vcam1P29533 Gm19178-201ENSMUST00000217524 1819 ntBASIC12.75□□□□□ -0.37
Vcam1P29533 Gm30228-201ENSMUST00000218501 1949 ntTSL 3 BASIC12.75□□□□□ -0.37
Vcam1P29533 Gpr137b-ps-202ENSMUST00000220647 1159 ntBASIC12.75□□□□□ -0.37
Vcam1P29533 CT025689.1-201ENSMUST00000225214 283 ntBASIC12.75□□□□□ -0.37
Vcam1P29533 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vcam1P29533 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vcam1P29533 P2rx7-202ENSMUST00000086247 712 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vcam1P29533 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vcam1P29533 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Vcam1P29533 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Vcam1P29533 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vcam1P29533 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vcam1P29533 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vcam1P29533 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vcam1P29533 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Vcam1P29533 Zfp512-208ENSMUST00000202244 3045 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vcam1P29533 Unc119-202ENSMUST00000100755 933 ntTSL 2 BASIC12.74□□□□□ -0.37
Vcam1P29533 Cbx7-202ENSMUST00000109615 710 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vcam1P29533 Gm5764-201ENSMUST00000118817 885 ntBASIC12.74□□□□□ -0.37
Vcam1P29533 Gm9625-201ENSMUST00000180422 955 ntBASIC12.74□□□□□ -0.37
Vcam1P29533 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC12.74□□□□□ -0.37
Vcam1P29533 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vcam1P29533 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vcam1P29533 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC12.74□□□□□ -0.37
Vcam1P29533 4930486N12Rik-201ENSMUST00000206668 632 ntBASIC12.74□□□□□ -0.37
Vcam1P29533 Gm44640-201ENSMUST00000206894 247 ntBASIC12.74□□□□□ -0.37
Vcam1P29533 AC158388.3-202ENSMUST00000225517 775 ntBASIC12.74□□□□□ -0.37
Vcam1P29533 AC169511.1-201ENSMUST00000227639 995 ntBASIC12.74□□□□□ -0.37
Vcam1P29533 Pla2g1b-201ENSMUST00000031495 557 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vcam1P29533 H2-Aa-201ENSMUST00000040655 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vcam1P29533 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vcam1P29533 Wfdc6a-201ENSMUST00000099096 805 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vcam1P29533 Wfs1-201ENSMUST00000043964 3787 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vcam1P29533 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vcam1P29533 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vcam1P29533 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vcam1P29533 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vcam1P29533 CT010480.4-201ENSMUST00000224654 2283 ntBASIC12.74□□□□□ -0.37
Vcam1P29533 Gm37264-201ENSMUST00000194916 2192 ntBASIC12.74□□□□□ -0.37
Vcam1P29533 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vcam1P29533 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vcam1P29533 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Vcam1P29533 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vcam1P29533 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vcam1P29533 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vcam1P29533 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC12.74□□□□□ -0.37
Vcam1P29533 Zbtb43-203ENSMUST00000113156 1828 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vcam1P29533 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vcam1P29533 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Vcam1P29533 Zscan10-205ENSMUST00000120967 2609 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Vcam1P29533 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Vcam1P29533 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC12.73□□□□□ -0.37
Vcam1P29533 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Vcam1P29533 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vcam1P29533 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Vcam1P29533 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vcam1P29533 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Vcam1P29533 Gm42970-201ENSMUST00000196407 1352 ntBASIC12.73□□□□□ -0.37
Vcam1P29533 Kif1a-210ENSMUST00000190723 6141 ntTSL 5 BASIC12.73□□□□□ -0.37
Vcam1P29533 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Vcam1P29533 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vcam1P29533 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.73□□□□□ -0.37
Vcam1P29533 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vcam1P29533 Trub2-203ENSMUST00000113807 1035 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vcam1P29533 Tnfrsf14-201ENSMUST00000123514 1018 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vcam1P29533 Gm16288-201ENSMUST00000137940 367 ntBASIC12.73□□□□□ -0.37
Vcam1P29533 Gm24074-201ENSMUST00000158178 260 ntBASIC12.73□□□□□ -0.37
Vcam1P29533 Park2-203ENSMUST00000168593 735 ntTSL 5 BASIC12.73□□□□□ -0.37
Vcam1P29533 Gm9574-201ENSMUST00000173127 845 ntBASIC12.73□□□□□ -0.37
Vcam1P29533 Gm16755-201ENSMUST00000180595 933 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vcam1P29533 Mir6387-201ENSMUST00000184042 108 ntBASIC12.73□□□□□ -0.37
Vcam1P29533 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
Vcam1P29533 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC12.73□□□□□ -0.37
Vcam1P29533 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC12.73□□□□□ -0.37
Vcam1P29533 CT030195.2-201ENSMUST00000226074 1286 ntBASIC12.73□□□□□ -0.37
Vcam1P29533 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vcam1P29533 Nt5dc1-202ENSMUST00000099973 761 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Vcam1P29533 Irak2-201ENSMUST00000059286 3196 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vcam1P29533 AC153524.2-202ENSMUST00000220401 1794 ntBASIC12.73□□□□□ -0.37
Vcam1P29533 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vcam1P29533 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC12.73□□□□□ -0.37
Vcam1P29533 Pidd1-202ENSMUST00000106005 2900 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vcam1P29533 Abat-201ENSMUST00000065987 4636 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vcam1P29533 Hgs-203ENSMUST00000106205 2898 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Vcam1P29533 Anp32e-204ENSMUST00000168106 2890 ntTSL 5 BASIC12.73□□□□□ -0.37
Vcam1P29533 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vcam1P29533 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vcam1P29533 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Vcam1P29533 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vcam1P29533 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Vcam1P29533 AC160410.1-201ENSMUST00000219298 1972 ntBASIC12.72□□□□□ -0.37
Vcam1P29533 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms