Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Gm37451-201ENSMUST00000194718 2167 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
P04224 Rabgef1-203ENSMUST00000119797 2690 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
P04224 Dcaf11-206ENSMUST00000128490 2660 ntAPPRIS P2 TSL 2 BASIC9.74□□□□□ -0.85
P04224 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
P04224 Agbl5-201ENSMUST00000069705 2922 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
P04224 Adcy4-201ENSMUST00000002398 3444 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
P04224 AC127242.1-201ENSMUST00000222861 1464 ntTSL 3 BASIC9.74□□□□□ -0.85
P04224 Kctd7-201ENSMUST00000040616 4291 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
P04224 Tfdp1-204ENSMUST00000209885 2511 ntAPPRIS P3 TSL 1 (best) BASIC9.74□□□□□ -0.85
P04224 Sypl-201ENSMUST00000020885 2019 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
P04224 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
P04224 Gm23270-201ENSMUST00000104055 131 ntBASIC9.74□□□□□ -0.85
P04224 Gm11511-201ENSMUST00000118146 540 ntBASIC9.74□□□□□ -0.85
P04224 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
P04224 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC9.74□□□□□ -0.85
P04224 Gm17099-201ENSMUST00000166780 412 ntTSL 3 BASIC9.74□□□□□ -0.85
P04224 Gm31256-201ENSMUST00000194705 506 ntBASIC9.74□□□□□ -0.85
P04224 Gm19187-201ENSMUST00000206781 892 ntBASIC9.74□□□□□ -0.85
P04224 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC9.74□□□□□ -0.85
P04224 Gzmn-202ENSMUST00000225535 989 ntBASIC9.74□□□□□ -0.85
P04224 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
P04224 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
P04224 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
P04224 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
P04224 Ctnnd1-207ENSMUST00000111676 5852 ntTSL 5 BASIC9.74□□□□□ -0.85
P04224 Olfr130-203ENSMUST00000217390 5959 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
P04224 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
P04224 Snapc1-201ENSMUST00000021532 6275 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
P04224 Skiv2l-201ENSMUST00000046022 3951 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
P04224 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
P04224 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
P04224 Setmar-201ENSMUST00000049246 1612 ntAPPRIS P1 TSL 1 (best) BASIC9.74□□□□□ -0.85
P04224 Urb1-203ENSMUST00000140920 7344 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
P04224 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
P04224 Cyp2b10-202ENSMUST00000072438 1916 ntAPPRIS P2 TSL 1 (best) BASIC9.74□□□□□ -0.85
P04224 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC9.74□□□□□ -0.85
P04224 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC9.74□□□□□ -0.85
P04224 Ampd2-201ENSMUST00000078912 3368 ntAPPRIS ALT2 TSL 5 BASIC9.74□□□□□ -0.85
P04224 Frmd4a-219ENSMUST00000177457 6538 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
P04224 Ablim1-212ENSMUST00000111558 3123 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
P04224 Gm45041-201ENSMUST00000207366 3108 ntBASIC9.73□□□□□ -0.85
P04224 Gckr-202ENSMUST00000201166 2272 ntAPPRIS ALT2 TSL 5 BASIC9.73□□□□□ -0.85
P04224 4930488L21Rik-202ENSMUST00000212638 3164 ntTSL 5 BASIC9.73□□□□□ -0.85
P04224 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
P04224 Gm16387-201ENSMUST00000180990 2632 ntBASIC9.73□□□□□ -0.85
P04224 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
P04224 Gm43807-201ENSMUST00000200678 1781 ntBASIC9.73□□□□□ -0.85
P04224 Rnh1-201ENSMUST00000106033 2091 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
P04224 Gm26614-201ENSMUST00000180386 3909 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
P04224 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
P04224 Phf8-203ENSMUST00000112662 3732 ntAPPRIS P3 TSL 5 BASIC9.73□□□□□ -0.85
P04224 Rgs8-202ENSMUST00000111810 5614 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
P04224 Atp1a2-202ENSMUST00000097464 3186 ntTSL 5 BASIC9.73□□□□□ -0.85
P04224 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC9.73□□□□□ -0.85
P04224 Rpl35a-204ENSMUST00000115078 500 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
P04224 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC9.73□□□□□ -0.85
P04224 Gm8062-201ENSMUST00000139696 444 ntBASIC9.73□□□□□ -0.85
P04224 Gm6963-201ENSMUST00000147879 379 ntBASIC9.73□□□□□ -0.85
P04224 Gm6548-201ENSMUST00000167498 1165 ntBASIC9.73□□□□□ -0.85
P04224 Atp10d-206ENSMUST00000169617 761 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
P04224 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC9.73□□□□□ -0.85
P04224 Gm27046-201ENSMUST00000182160 463 ntBASIC9.73□□□□□ -0.85
P04224 Gm5745-201ENSMUST00000183748 313 ntBASIC9.73□□□□□ -0.85
P04224 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC9.73□□□□□ -0.85
P04224 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC9.73□□□□□ -0.85
P04224 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC9.73□□□□□ -0.85
P04224 Gm18935-201ENSMUST00000212692 664 ntBASIC9.73□□□□□ -0.85
P04224 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC9.73□□□□□ -0.85
P04224 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC9.73□□□□□ -0.85
P04224 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
P04224 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
P04224 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
P04224 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
P04224 AC156802.2-203ENSMUST00000226032 1906 ntBASIC9.73□□□□□ -0.85
P04224 Trim16-202ENSMUST00000072639 1929 ntTSL 2 BASIC9.73□□□□□ -0.85
P04224 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
P04224 Epn2-204ENSMUST00000108713 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
P04224 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
P04224 Gpr35-203ENSMUST00000169198 4214 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
P04224 Tgif1-201ENSMUST00000059775 1631 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
P04224 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
P04224 Taf6-202ENSMUST00000110936 2308 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
P04224 Tmem184b-205ENSMUST00000228002 3315 ntBASIC9.73□□□□□ -0.85
P04224 Gm19410-201ENSMUST00000207505 6352 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
P04224 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC9.73□□□□□ -0.85
P04224 Zc3h18-202ENSMUST00000093073 3705 ntAPPRIS ALT2 TSL 1 (best) BASIC9.73□□□□□ -0.85
P04224 Sap30bpos-201ENSMUST00000132264 2352 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
P04224 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC9.73□□□□□ -0.85
P04224 Dio2-201ENSMUST00000082432 5815 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
P04224 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
P04224 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC9.73□□□□□ -0.85
P04224 Elovl5-201ENSMUST00000034904 2782 ntAPPRIS P1 TSL 1 (best) BASIC9.73□□□□□ -0.85
P04224 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC9.73□□□□□ -0.85
P04224 Gcc2-201ENSMUST00000057659 6547 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
P04224 Dglucy-201ENSMUST00000069782 3295 ntAPPRIS P2 TSL 1 (best) BASIC9.73□□□□□ -0.85
P04224 Cct3-204ENSMUST00000164166 1804 ntTSL 5 BASIC9.72□□□□□ -0.85
P04224 Gm21969-201ENSMUST00000178644 4402 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
P04224 Cxcr2-201ENSMUST00000027372 2220 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
P04224 4930512J16Rik-201ENSMUST00000203704 1859 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
P04224 Magt1-204ENSMUST00000151689 4531 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms