Protein–RNA interactions for Protein: O89079

Cope, Coatomer subunit epsilon, mousemouse

Predictions only

Length 308 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopeO89079 Gm5869-201ENSMUST00000200248 1257 ntBASIC11.43□□□□□ -0.58
CopeO89079 Gm7504-201ENSMUST00000201449 424 ntBASIC11.43□□□□□ -0.58
CopeO89079 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CopeO89079 Gm45682-201ENSMUST00000209434 1256 ntTSL 5 BASIC11.43□□□□□ -0.58
CopeO89079 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.43□□□□□ -0.58
CopeO89079 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC11.43□□□□□ -0.58
CopeO89079 CT009713.8-202ENSMUST00000224732 385 ntBASIC11.43□□□□□ -0.58
CopeO89079 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.43□□□□□ -0.58
CopeO89079 Pbp2-201ENSMUST00000050471 1279 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
CopeO89079 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CopeO89079 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CopeO89079 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC11.43□□□□□ -0.58
CopeO89079 Frmd4b-201ENSMUST00000032146 3159 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CopeO89079 Cyp26b1-205ENSMUST00000205228 4288 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CopeO89079 Slc25a12-206ENSMUST00000151937 6351 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CopeO89079 Gm6124-201ENSMUST00000188240 2580 ntBASIC11.43□□□□□ -0.58
CopeO89079 Oas1d-201ENSMUST00000044224 2021 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CopeO89079 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CopeO89079 Nudt7-203ENSMUST00000109109 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CopeO89079 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CopeO89079 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CopeO89079 Cd6-203ENSMUST00000080292 3032 ntAPPRIS P3 TSL 1 (best) BASIC11.43□□□□□ -0.58
CopeO89079 Pde4c-202ENSMUST00000110095 3290 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CopeO89079 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.43□□□□□ -0.58
CopeO89079 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CopeO89079 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC11.42□□□□□ -0.58
CopeO89079 1700018A04Rik-204ENSMUST00000221561 2569 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CopeO89079 Morf4l2-212ENSMUST00000164609 1811 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
CopeO89079 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CopeO89079 AC154528.2-201ENSMUST00000228432 3023 ntBASIC11.42□□□□□ -0.58
CopeO89079 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CopeO89079 Rabl2-202ENSMUST00000094056 1322 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CopeO89079 Prom2-202ENSMUST00000103214 4190 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CopeO89079 Pex26-203ENSMUST00000120066 3861 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CopeO89079 Sorbs3-201ENSMUST00000022682 2914 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CopeO89079 Gm13461-201ENSMUST00000120980 662 ntBASIC11.42□□□□□ -0.58
CopeO89079 Gm6039-201ENSMUST00000121667 1250 ntBASIC11.42□□□□□ -0.58
CopeO89079 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CopeO89079 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC11.42□□□□□ -0.58
CopeO89079 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC11.42□□□□□ -0.58
CopeO89079 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CopeO89079 Zfp133-ps-204ENSMUST00000149523 424 ntTSL 3 BASIC11.42□□□□□ -0.58
CopeO89079 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CopeO89079 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC11.42□□□□□ -0.58
CopeO89079 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CopeO89079 Gm7741-201ENSMUST00000181445 989 ntBASIC11.42□□□□□ -0.58
CopeO89079 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC11.42□□□□□ -0.58
CopeO89079 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC11.42□□□□□ -0.58
CopeO89079 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC11.42□□□□□ -0.58
CopeO89079 Ighv1-48-201ENSMUST00000191795 294 ntBASIC11.42□□□□□ -0.58
CopeO89079 Gm38321-201ENSMUST00000195053 235 ntBASIC11.42□□□□□ -0.58
CopeO89079 Gm7003-201ENSMUST00000195089 312 ntBASIC11.42□□□□□ -0.58
CopeO89079 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC11.42□□□□□ -0.58
CopeO89079 Gm10069-203ENSMUST00000204081 907 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CopeO89079 AC107638.1-201ENSMUST00000213690 1061 ntBASIC11.42□□□□□ -0.58
CopeO89079 Gm40639-201ENSMUST00000214642 625 ntTSL 5 BASIC11.42□□□□□ -0.58
CopeO89079 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.42□□□□□ -0.58
CopeO89079 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.42□□□□□ -0.58
CopeO89079 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CopeO89079 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CopeO89079 Mknk2-201ENSMUST00000003433 3065 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CopeO89079 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC11.42□□□□□ -0.58
CopeO89079 Satb1-204ENSMUST00000133574 3461 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CopeO89079 Galm-201ENSMUST00000039205 2314 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CopeO89079 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.42□□□□□ -0.58
CopeO89079 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CopeO89079 Gm3765-201ENSMUST00000130985 1447 ntBASIC11.42□□□□□ -0.58
CopeO89079 Rtn4ip1-202ENSMUST00000105492 2059 ntTSL 3 BASIC11.42□□□□□ -0.58
CopeO89079 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.58
CopeO89079 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
CopeO89079 Mybph-201ENSMUST00000038445 1828 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CopeO89079 Angptl2-201ENSMUST00000004208 3339 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
CopeO89079 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CopeO89079 Styx-205ENSMUST00000226873 12974 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
CopeO89079 Gpc6-202ENSMUST00000088483 3488 ntAPPRIS P3 TSL 5 BASIC11.41□□□□□ -0.58
CopeO89079 AC108416.1-201ENSMUST00000228755 1558 ntBASIC11.41□□□□□ -0.58
CopeO89079 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CopeO89079 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC11.41□□□□□ -0.58
CopeO89079 Gm11571-201ENSMUST00000136820 2396 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CopeO89079 Pigo-202ENSMUST00000098109 4239 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
CopeO89079 Sgk3-203ENSMUST00000168907 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CopeO89079 Phf8-211ENSMUST00000168501 6359 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
CopeO89079 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CopeO89079 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC11.41□□□□□ -0.58
CopeO89079 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CopeO89079 Optc-201ENSMUST00000124051 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CopeO89079 Gm37651-201ENSMUST00000194679 1494 ntBASIC11.41□□□□□ -0.58
CopeO89079 Crcp-201ENSMUST00000026608 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CopeO89079 Card14-202ENSMUST00000106250 4206 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
CopeO89079 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
CopeO89079 Gm17151-201ENSMUST00000105760 367 ntTSL 3 BASIC11.41□□□□□ -0.58
CopeO89079 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.41□□□□□ -0.58
CopeO89079 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
CopeO89079 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
CopeO89079 Gm12501-201ENSMUST00000119163 529 ntBASIC11.41□□□□□ -0.58
CopeO89079 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CopeO89079 4931406G06Rik-201ENSMUST00000147848 1252 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
CopeO89079 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC11.41□□□□□ -0.58
CopeO89079 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC11.41□□□□□ -0.58
CopeO89079 Gm17376-201ENSMUST00000166016 84 ntBASIC11.41□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms