Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc1a6O35544 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc1a6O35544 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc1a6O35544 Gm10463-202ENSMUST00000195772 2889 ntBASIC10.91□□□□□ -0.66
Slc1a6O35544 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Slc1a6O35544 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Slc1a6O35544 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Slc1a6O35544 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc1a6O35544 Bsdc1-201ENSMUST00000048162 2823 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc1a6O35544 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Slc1a6O35544 Gm32511-202ENSMUST00000217021 2069 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Slc1a6O35544 Katnal2-208ENSMUST00000137498 1824 ntTSL 5 BASIC10.91□□□□□ -0.66
Slc1a6O35544 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Slc1a6O35544 Srrm4-202ENSMUST00000139425 2798 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Slc1a6O35544 Gm28268-201ENSMUST00000188966 2528 ntTSL 5 BASIC10.91□□□□□ -0.66
Slc1a6O35544 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Slc1a6O35544 Dclk1-204ENSMUST00000196745 7962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc1a6O35544 Parvg-207ENSMUST00000163667 2700 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Slc1a6O35544 AW549877-201ENSMUST00000046633 5076 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc1a6O35544 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc1a6O35544 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Slc1a6O35544 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc1a6O35544 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc1a6O35544 Gm12218-201ENSMUST00000117666 399 ntBASIC10.91□□□□□ -0.66
Slc1a6O35544 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC10.91□□□□□ -0.66
Slc1a6O35544 Mrpl20-202ENSMUST00000130188 442 ntTSL 3 BASIC10.91□□□□□ -0.66
Slc1a6O35544 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Slc1a6O35544 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc1a6O35544 Gm25881-201ENSMUST00000157783 103 ntBASIC10.91□□□□□ -0.66
Slc1a6O35544 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc1a6O35544 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC10.91□□□□□ -0.66
Slc1a6O35544 Gm25890-201ENSMUST00000177643 165 ntBASIC10.91□□□□□ -0.66
Slc1a6O35544 Rnu1b2-201ENSMUST00000178073 165 ntBASIC10.91□□□□□ -0.66
Slc1a6O35544 Rnu1b1-201ENSMUST00000178250 165 ntBASIC10.91□□□□□ -0.66
Slc1a6O35544 Gm22614-201ENSMUST00000178300 165 ntBASIC10.91□□□□□ -0.66
Slc1a6O35544 Gm7985-201ENSMUST00000183329 981 ntBASIC10.91□□□□□ -0.66
Slc1a6O35544 Gm27175-201ENSMUST00000183759 606 ntTSL 3 BASIC10.91□□□□□ -0.66
Slc1a6O35544 Gm27223-201ENSMUST00000184653 606 ntTSL 3 BASIC10.91□□□□□ -0.66
Slc1a6O35544 Gm17825-201ENSMUST00000206836 794 ntBASIC10.91□□□□□ -0.66
Slc1a6O35544 Gm19208-201ENSMUST00000213861 912 ntBASIC10.91□□□□□ -0.66
Slc1a6O35544 CT030161.3-201ENSMUST00000218235 367 ntTSL 3 BASIC10.91□□□□□ -0.66
Slc1a6O35544 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Slc1a6O35544 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc1a6O35544 Gm22042-201ENSMUST00000082989 165 ntBASIC10.91□□□□□ -0.66
Slc1a6O35544 Gm26110-201ENSMUST00000083971 165 ntBASIC10.91□□□□□ -0.66
Slc1a6O35544 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC10.91□□□□□ -0.66
Slc1a6O35544 AC129336.2-201ENSMUST00000218053 3086 ntBASIC10.91□□□□□ -0.66
Slc1a6O35544 Gm26912-201ENSMUST00000180988 1483 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Slc1a6O35544 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc1a6O35544 9130227L01Rik-202ENSMUST00000189293 1906 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Slc1a6O35544 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc1a6O35544 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Slc1a6O35544 Jmjd4-201ENSMUST00000045279 4315 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Slc1a6O35544 Gm42851-201ENSMUST00000201325 1411 ntBASIC10.91□□□□□ -0.66
Slc1a6O35544 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc1a6O35544 Specc1-214ENSMUST00000202389 3363 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Slc1a6O35544 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Slc1a6O35544 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Slc1a6O35544 Mta1-202ENSMUST00000069690 2697 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Slc1a6O35544 Zfp606-202ENSMUST00000123589 3509 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Slc1a6O35544 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Slc1a6O35544 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Slc1a6O35544 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Slc1a6O35544 Gm9915-201ENSMUST00000066196 1383 ntBASIC10.9□□□□□ -0.66
Slc1a6O35544 Gm21986-201ENSMUST00000113671 5560 ntTSL 2 BASIC10.9□□□□□ -0.66
Slc1a6O35544 Mthfd1l-203ENSMUST00000120585 3687 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc1a6O35544 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc1a6O35544 C2cd5-201ENSMUST00000087485 4265 ntTSL 5 BASIC10.9□□□□□ -0.66
Slc1a6O35544 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC10.9□□□□□ -0.66
Slc1a6O35544 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc1a6O35544 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.66
Slc1a6O35544 Csrnp3-208ENSMUST00000176109 2958 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Slc1a6O35544 Rnf20-201ENSMUST00000029989 4154 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc1a6O35544 Slitrk3-202ENSMUST00000192477 4592 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc1a6O35544 Clcn6-205ENSMUST00000137724 5198 ntAPPRIS ALT1 TSL 5 BASIC10.9□□□□□ -0.66
Slc1a6O35544 AC122367.1-201ENSMUST00000221978 1709 ntBASIC10.9□□□□□ -0.66
Slc1a6O35544 Oas1h-201ENSMUST00000072476 1703 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc1a6O35544 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Slc1a6O35544 CT868720.1-201ENSMUST00000223069 2544 ntBASIC10.9□□□□□ -0.66
Slc1a6O35544 Tmem184b-202ENSMUST00000178522 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc1a6O35544 Armcx2-202ENSMUST00000113193 3666 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc1a6O35544 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Slc1a6O35544 Gm22323-201ENSMUST00000103832 109 ntBASIC10.9□□□□□ -0.66
Slc1a6O35544 Gm12012-201ENSMUST00000118857 1066 ntBASIC10.9□□□□□ -0.66
Slc1a6O35544 Thegl-203ENSMUST00000118941 746 ntTSL 3 BASIC10.9□□□□□ -0.66
Slc1a6O35544 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC10.9□□□□□ -0.66
Slc1a6O35544 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Slc1a6O35544 Gm15412-201ENSMUST00000137193 1096 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Slc1a6O35544 Rtl1-201ENSMUST00000149046 6358 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Slc1a6O35544 Cdpf1-205ENSMUST00000150995 566 ntAPPRIS P1 TSL 3 BASIC10.9□□□□□ -0.66
Slc1a6O35544 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Slc1a6O35544 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC10.9□□□□□ -0.66
Slc1a6O35544 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Slc1a6O35544 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC10.9□□□□□ -0.66
Slc1a6O35544 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Slc1a6O35544 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Slc1a6O35544 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Slc1a6O35544 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Slc1a6O35544 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC10.9□□□□□ -0.66
Slc1a6O35544 Gm29283-201ENSMUST00000187394 288 ntTSL 5 BASIC10.9□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms