Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tcof1O08784 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Tcof1O08784 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tcof1O08784 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Tcof1O08784 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Tcof1O08784 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tcof1O08784 Gm17281-201ENSMUST00000180732 3589 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Tcof1O08784 Pcif1-201ENSMUST00000041643 5772 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tcof1O08784 Gm5739-201ENSMUST00000208601 1703 ntBASIC13.02□□□□□ -0.33
Tcof1O08784 Ddx11-205ENSMUST00000224497 4141 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.33
Tcof1O08784 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tcof1O08784 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Tcof1O08784 Gm15991-202ENSMUST00000212123 3565 ntBASIC13.01□□□□□ -0.33
Tcof1O08784 Gm9466-201ENSMUST00000218144 2246 ntBASIC13.01□□□□□ -0.33
Tcof1O08784 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tcof1O08784 Dclre1b-203ENSMUST00000106832 2299 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tcof1O08784 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tcof1O08784 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tcof1O08784 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tcof1O08784 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Tcof1O08784 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tcof1O08784 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tcof1O08784 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC13.01□□□□□ -0.33
Tcof1O08784 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC13.01□□□□□ -0.33
Tcof1O08784 Gm11980-201ENSMUST00000121445 986 ntBASIC13.01□□□□□ -0.33
Tcof1O08784 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC13.01□□□□□ -0.33
Tcof1O08784 Gm14266-202ENSMUST00000146542 1067 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tcof1O08784 Gm12907-201ENSMUST00000148027 507 ntTSL 2 BASIC13.01□□□□□ -0.33
Tcof1O08784 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tcof1O08784 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Tcof1O08784 Mir99ahg-209ENSMUST00000182820 835 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tcof1O08784 CT030653.1-201ENSMUST00000224382 1279 ntBASIC13.01□□□□□ -0.33
Tcof1O08784 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tcof1O08784 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tcof1O08784 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Tcof1O08784 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC13.01□□□□□ -0.33
Tcof1O08784 Katnal2-205ENSMUST00000126153 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tcof1O08784 Ufd1-202ENSMUST00000115578 2078 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Tcof1O08784 Fyn-207ENSMUST00000146287 2135 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tcof1O08784 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tcof1O08784 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tcof1O08784 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tcof1O08784 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC13.01□□□□□ -0.33
Tcof1O08784 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Tcof1O08784 Gm33366-201ENSMUST00000195583 3827 ntBASIC13.01□□□□□ -0.33
Tcof1O08784 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tcof1O08784 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Tcof1O08784 Spock2-203ENSMUST00000165024 3699 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Tcof1O08784 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tcof1O08784 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tcof1O08784 Rxfp2-206ENSMUST00000201612 2470 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Tcof1O08784 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tcof1O08784 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tcof1O08784 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Tcof1O08784 Cenpn-203ENSMUST00000212263 1616 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tcof1O08784 E330023G01Rik-201ENSMUST00000186387 1483 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tcof1O08784 Meikin-201ENSMUST00000094193 1433 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tcof1O08784 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC13□□□□□ -0.33
Tcof1O08784 Fam3a-204ENSMUST00000114141 1243 ntTSL 5 BASIC13□□□□□ -0.33
Tcof1O08784 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Tcof1O08784 Gm13047-201ENSMUST00000117116 815 ntBASIC13□□□□□ -0.33
Tcof1O08784 Gm14592-201ENSMUST00000117201 560 ntBASIC13□□□□□ -0.33
Tcof1O08784 Gm12816-201ENSMUST00000118069 1212 ntBASIC13□□□□□ -0.33
Tcof1O08784 Gm6322-201ENSMUST00000118789 1004 ntBASIC13□□□□□ -0.33
Tcof1O08784 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tcof1O08784 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tcof1O08784 Gm15952-202ENSMUST00000144542 556 ntTSL 3 BASIC13□□□□□ -0.33
Tcof1O08784 Gm22379-201ENSMUST00000157480 131 ntBASIC13□□□□□ -0.33
Tcof1O08784 Gm17192-201ENSMUST00000169031 511 ntBASIC13□□□□□ -0.33
Tcof1O08784 Taar8c-201ENSMUST00000170267 1035 ntAPPRIS P1 BASIC13□□□□□ -0.33
Tcof1O08784 Gm44696-201ENSMUST00000181943 1229 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tcof1O08784 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Tcof1O08784 Gm4753-201ENSMUST00000188327 1255 ntBASIC13□□□□□ -0.33
Tcof1O08784 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC13□□□□□ -0.33
Tcof1O08784 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Tcof1O08784 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC13□□□□□ -0.33
Tcof1O08784 Taar8a-201ENSMUST00000051133 1035 ntAPPRIS P1 BASIC13□□□□□ -0.33
Tcof1O08784 Naca-201ENSMUST00000073868 885 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tcof1O08784 1700029P11Rik-201ENSMUST00000074608 1024 ntAPPRIS P1 BASIC13□□□□□ -0.33
Tcof1O08784 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Tcof1O08784 Gm10020-201ENSMUST00000081993 612 ntBASIC13□□□□□ -0.33
Tcof1O08784 Hist1h2bl-201ENSMUST00000091756 381 ntAPPRIS P1 BASIC13□□□□□ -0.33
Tcof1O08784 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tcof1O08784 Gm13306-201ENSMUST00000098122 418 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Tcof1O08784 Ctxn2-201ENSMUST00000099452 1028 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tcof1O08784 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Tcof1O08784 Grhl1-202ENSMUST00000085553 3469 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tcof1O08784 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Tcof1O08784 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC13□□□□□ -0.33
Tcof1O08784 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Tcof1O08784 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tcof1O08784 Spock3-203ENSMUST00000118003 2860 ntAPPRIS P3 TSL 5 BASIC13□□□□□ -0.33
Tcof1O08784 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC13□□□□□ -0.33
Tcof1O08784 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tcof1O08784 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tcof1O08784 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Tcof1O08784 Dtl-201ENSMUST00000027933 4212 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Tcof1O08784 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Tcof1O08784 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC13□□□□□ -0.33
Tcof1O08784 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 52.2 ms