Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NpcdF8VQB8 Gm26174-201ENSMUST00000158415 219 ntBASIC13.46□□□□□ -0.25
NpcdF8VQB8 Mir6387-201ENSMUST00000184042 108 ntBASIC13.46□□□□□ -0.25
NpcdF8VQB8 Mpzl1-203ENSMUST00000191818 853 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
NpcdF8VQB8 Gm2474-201ENSMUST00000195162 559 ntBASIC13.46□□□□□ -0.25
NpcdF8VQB8 Gm6352-201ENSMUST00000203583 1134 ntBASIC13.46□□□□□ -0.25
NpcdF8VQB8 Olfr1380-201ENSMUST00000204300 938 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
NpcdF8VQB8 Olfr1358-201ENSMUST00000204477 1064 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
NpcdF8VQB8 Wbp1-209ENSMUST00000205023 716 ntBASIC13.46□□□□□ -0.25
NpcdF8VQB8 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC13.46□□□□□ -0.25
NpcdF8VQB8 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC13.46□□□□□ -0.25
NpcdF8VQB8 AC155709.2-201ENSMUST00000219360 678 ntTSL 3 BASIC13.46□□□□□ -0.25
NpcdF8VQB8 AC116797.2-202ENSMUST00000223587 1017 ntBASIC13.46□□□□□ -0.25
NpcdF8VQB8 Rnasek-201ENSMUST00000040428 611 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NpcdF8VQB8 Fthl17e-201ENSMUST00000096509 841 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
NpcdF8VQB8 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
NpcdF8VQB8 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC13.46□□□□□ -0.25
NpcdF8VQB8 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
NpcdF8VQB8 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.26
NpcdF8VQB8 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
NpcdF8VQB8 Padi6-201ENSMUST00000038749 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NpcdF8VQB8 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
NpcdF8VQB8 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
NpcdF8VQB8 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
NpcdF8VQB8 Ttc8-201ENSMUST00000079146 2270 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
NpcdF8VQB8 Mapk4-202ENSMUST00000159162 3514 ntTSL 5 BASIC13.46□□□□□ -0.26
NpcdF8VQB8 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
NpcdF8VQB8 Acsf3-201ENSMUST00000015160 2206 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
NpcdF8VQB8 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC13.45□□□□□ -0.26
NpcdF8VQB8 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
NpcdF8VQB8 Gm43174-201ENSMUST00000195914 2445 ntBASIC13.45□□□□□ -0.26
NpcdF8VQB8 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NpcdF8VQB8 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
NpcdF8VQB8 Dlgap4-203ENSMUST00000099145 3402 ntAPPRIS P4 TSL 1 (best) BASIC13.45□□□□□ -0.26
NpcdF8VQB8 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
NpcdF8VQB8 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC13.45□□□□□ -0.26
NpcdF8VQB8 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
NpcdF8VQB8 BC052040-203ENSMUST00000166472 2770 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NpcdF8VQB8 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NpcdF8VQB8 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
NpcdF8VQB8 Pygo2-202ENSMUST00000107413 2911 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NpcdF8VQB8 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NpcdF8VQB8 Enah-201ENSMUST00000078719 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
NpcdF8VQB8 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NpcdF8VQB8 Gm5740-201ENSMUST00000211003 1857 ntBASIC13.45□□□□□ -0.26
NpcdF8VQB8 Pfn1-202ENSMUST00000108549 608 ntTSL 2 BASIC13.45□□□□□ -0.26
NpcdF8VQB8 Tmem181c-ps-201ENSMUST00000115772 1288 ntBASIC13.45□□□□□ -0.26
NpcdF8VQB8 Gm6754-201ENSMUST00000117124 913 ntBASIC13.45□□□□□ -0.26
NpcdF8VQB8 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC13.45□□□□□ -0.26
NpcdF8VQB8 Tpi1-203ENSMUST00000149610 802 ntTSL 2 BASIC13.45□□□□□ -0.26
NpcdF8VQB8 Fhit-201ENSMUST00000160340 1094 ntTSL 5 BASIC13.45□□□□□ -0.26
NpcdF8VQB8 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NpcdF8VQB8 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NpcdF8VQB8 Gm27826-201ENSMUST00000175282 255 ntBASIC13.45□□□□□ -0.26
NpcdF8VQB8 Gm5808-201ENSMUST00000178090 357 ntBASIC13.45□□□□□ -0.26
NpcdF8VQB8 Gm21958-201ENSMUST00000178832 648 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
NpcdF8VQB8 Fhit-208ENSMUST00000179394 453 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
NpcdF8VQB8 1700008K24Rik-201ENSMUST00000185974 833 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NpcdF8VQB8 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC13.45□□□□□ -0.26
NpcdF8VQB8 Gm45783-201ENSMUST00000210877 656 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
NpcdF8VQB8 AC118639.1-202ENSMUST00000226957 653 ntBASIC13.45□□□□□ -0.26
NpcdF8VQB8 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NpcdF8VQB8 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
NpcdF8VQB8 Asb13-201ENSMUST00000042288 4453 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NpcdF8VQB8 Ivns1abp-202ENSMUST00000097543 3337 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NpcdF8VQB8 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NpcdF8VQB8 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
NpcdF8VQB8 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
NpcdF8VQB8 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
NpcdF8VQB8 Gm9915-201ENSMUST00000066196 1383 ntBASIC13.45□□□□□ -0.26
NpcdF8VQB8 Klk1b5-201ENSMUST00000074359 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
NpcdF8VQB8 Atg4c-203ENSMUST00000180278 2792 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
NpcdF8VQB8 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
NpcdF8VQB8 Gm12200-201ENSMUST00000144876 1858 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
NpcdF8VQB8 Abcd3-201ENSMUST00000029770 3489 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NpcdF8VQB8 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NpcdF8VQB8 Celf4-201ENSMUST00000025117 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
NpcdF8VQB8 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
NpcdF8VQB8 Slc19a1-209ENSMUST00000144234 2309 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
NpcdF8VQB8 Fcrl1-201ENSMUST00000072480 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
NpcdF8VQB8 Gm10842-201ENSMUST00000100338 369 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
NpcdF8VQB8 Gm25148-201ENSMUST00000104611 123 ntBASIC13.44□□□□□ -0.26
NpcdF8VQB8 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC13.44□□□□□ -0.26
NpcdF8VQB8 Olfr1263-201ENSMUST00000111507 1029 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
NpcdF8VQB8 Gm13426-201ENSMUST00000117887 795 ntBASIC13.44□□□□□ -0.26
NpcdF8VQB8 Gm15172-201ENSMUST00000118945 1046 ntBASIC13.44□□□□□ -0.26
NpcdF8VQB8 Gm3828-201ENSMUST00000121817 257 ntBASIC13.44□□□□□ -0.26
NpcdF8VQB8 Gm7805-201ENSMUST00000154348 448 ntBASIC13.44□□□□□ -0.26
NpcdF8VQB8 Gm8601-201ENSMUST00000182096 909 ntBASIC13.44□□□□□ -0.26
NpcdF8VQB8 Gm7445-201ENSMUST00000192115 340 ntBASIC13.44□□□□□ -0.26
NpcdF8VQB8 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC13.44□□□□□ -0.26
NpcdF8VQB8 Gm44777-203ENSMUST00000206930 571 ntTSL 3 BASIC13.44□□□□□ -0.26
NpcdF8VQB8 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
NpcdF8VQB8 AC124503.1-201ENSMUST00000218524 526 ntTSL 3 BASIC13.44□□□□□ -0.26
NpcdF8VQB8 Gm18065-201ENSMUST00000221395 526 ntBASIC13.44□□□□□ -0.26
NpcdF8VQB8 Pgk1-rs7-201ENSMUST00000085735 1255 ntBASIC13.44□□□□□ -0.26
NpcdF8VQB8 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC13.44□□□□□ -0.26
NpcdF8VQB8 Spata16-202ENSMUST00000108305 1789 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
NpcdF8VQB8 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
NpcdF8VQB8 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 58.8 ms