Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 Myh13-201ENSMUST00000081911 5817 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 2700068H02Rik-201ENSMUST00000137882 1872 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 Olfr582-202ENSMUST00000210119 1787 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 Ybey-201ENSMUST00000049185 4522 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 Kcnma1-213ENSMUST00000188991 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
Sec61a2Q9JLR1 Gm26660-202ENSMUST00000223620 4112 ntBASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Calcoco1-204ENSMUST00000171838 2968 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Gm44913-201ENSMUST00000208060 2990 ntBASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Col4a6-201ENSMUST00000101205 6648 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Zfp612-201ENSMUST00000058804 3180 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Gm12463-201ENSMUST00000118271 849 ntBASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Gm11956-201ENSMUST00000119525 512 ntBASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Lyzl4os-202ENSMUST00000156364 726 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Gm7741-201ENSMUST00000181445 989 ntBASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Gm7504-201ENSMUST00000201449 424 ntBASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 AC166992.1-201ENSMUST00000216356 565 ntBASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Gm4797-201ENSMUST00000219075 1283 ntBASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Gm33979-201ENSMUST00000219486 691 ntTSL 5 BASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Gm14267-206ENSMUST00000226870 1209 ntBASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Kif2c-202ENSMUST00000106436 2378 ntAPPRIS ALT2 TSL 5 BASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 AC153380.1-201ENSMUST00000214959 2364 ntBASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Anks1b-233ENSMUST00000183156 4248 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Ppp6r3-203ENSMUST00000172362 4633 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Shank2-201ENSMUST00000097929 4418 ntTSL 5 BASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Rnf13-210ENSMUST00000200497 2573 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Gm45416-201ENSMUST00000209713 2201 ntBASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Gaa-201ENSMUST00000026666 3363 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
Sec61a2Q9JLR1 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 Dnmbp-206ENSMUST00000212592 3901 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 Kif4-201ENSMUST00000048962 4983 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 Ltbp1-203ENSMUST00000112516 5140 ntAPPRIS P3 TSL 5 BASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 Taf3-204ENSMUST00000114909 4897 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 1700061G19Rik-201ENSMUST00000025048 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 Ddr1-212ENSMUST00000166980 3627 ntAPPRIS P3 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 Dusp11-201ENSMUST00000032071 6435 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 Pcgf2-206ENSMUST00000169807 2347 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 Olfr95-201ENSMUST00000060728 5129 ntAPPRIS P1 BASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 Gsto2-202ENSMUST00000120645 1277 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 Gm15329-201ENSMUST00000121408 155 ntBASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 Gm37986-201ENSMUST00000193285 383 ntBASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Sec61a2Q9JLR1 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms