Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC11.98□□□□□ -0.49
Tlr3Q99MB1 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.98□□□□□ -0.49
Tlr3Q99MB1 Gm37458-201ENSMUST00000194055 410 ntBASIC11.98□□□□□ -0.49
Tlr3Q99MB1 AC122024.3-201ENSMUST00000217719 294 ntBASIC11.98□□□□□ -0.49
Tlr3Q99MB1 Gm9661-201ENSMUST00000221611 1122 ntBASIC11.98□□□□□ -0.49
Tlr3Q99MB1 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tlr3Q99MB1 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Tlr3Q99MB1 Cenpu-202ENSMUST00000093518 783 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tlr3Q99MB1 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.98□□□□□ -0.49
Tlr3Q99MB1 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tlr3Q99MB1 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Tlr3Q99MB1 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tlr3Q99MB1 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tlr3Q99MB1 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tlr3Q99MB1 Tbl2-204ENSMUST00000153183 7488 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tlr3Q99MB1 Fut10-202ENSMUST00000110527 2327 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tlr3Q99MB1 Bcl2l14-201ENSMUST00000032321 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tlr3Q99MB1 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Tlr3Q99MB1 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tlr3Q99MB1 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tlr3Q99MB1 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Tlr3Q99MB1 Tcim-201ENSMUST00000052622 1805 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Tlr3Q99MB1 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tlr3Q99MB1 Prrx1-201ENSMUST00000027878 4952 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tlr3Q99MB1 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tlr3Q99MB1 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tlr3Q99MB1 Jade1-201ENSMUST00000026865 5481 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tlr3Q99MB1 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Tlr3Q99MB1 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tlr3Q99MB1 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tlr3Q99MB1 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tlr3Q99MB1 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Tlr3Q99MB1 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tlr3Q99MB1 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tlr3Q99MB1 Cad-211ENSMUST00000202795 6559 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tlr3Q99MB1 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tlr3Q99MB1 Gm16071-201ENSMUST00000119589 793 ntBASIC11.97□□□□□ -0.49
Tlr3Q99MB1 Gm12628-201ENSMUST00000122193 382 ntBASIC11.97□□□□□ -0.49
Tlr3Q99MB1 1700021J08Rik-201ENSMUST00000138729 575 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tlr3Q99MB1 Gm13830-203ENSMUST00000148916 247 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tlr3Q99MB1 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tlr3Q99MB1 Spdye4a-202ENSMUST00000160502 1245 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tlr3Q99MB1 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC11.97□□□□□ -0.49
Tlr3Q99MB1 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Tlr3Q99MB1 Rps28-203ENSMUST00000173019 437 ntAPPRIS P1 TSL 3 BASIC11.97□□□□□ -0.49
Tlr3Q99MB1 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Tlr3Q99MB1 Gm25951-201ENSMUST00000175330 64 ntBASIC11.97□□□□□ -0.49
Tlr3Q99MB1 Gm17826-201ENSMUST00000189720 798 ntBASIC11.97□□□□□ -0.49
Tlr3Q99MB1 Gm7271-202ENSMUST00000191515 836 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Tlr3Q99MB1 Diablo-210ENSMUST00000200247 748 ntTSL 5 BASIC11.97□□□□□ -0.49
Tlr3Q99MB1 Gm19091-201ENSMUST00000208120 978 ntBASIC11.97□□□□□ -0.49
Tlr3Q99MB1 Gm36176-201ENSMUST00000218749 501 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Tlr3Q99MB1 Cinp-204ENSMUST00000221102 536 ntTSL 2 BASIC11.97□□□□□ -0.49
Tlr3Q99MB1 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tlr3Q99MB1 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tlr3Q99MB1 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tlr3Q99MB1 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tlr3Q99MB1 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tlr3Q99MB1 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tlr3Q99MB1 Ppp2r1b-201ENSMUST00000034560 3647 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tlr3Q99MB1 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tlr3Q99MB1 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tlr3Q99MB1 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tlr3Q99MB1 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Tlr3Q99MB1 Dnmt3a-203ENSMUST00000111186 5424 ntAPPRIS P3 TSL 5 BASIC11.97□□□□□ -0.49
Tlr3Q99MB1 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tlr3Q99MB1 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Tlr3Q99MB1 Tnc-202ENSMUST00000107371 2928 ntTSL 5 BASIC11.97□□□□□ -0.49
Tlr3Q99MB1 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tlr3Q99MB1 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Tlr3Q99MB1 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tlr3Q99MB1 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Tlr3Q99MB1 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Tlr3Q99MB1 Csnk1g1-202ENSMUST00000117849 5173 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Tlr3Q99MB1 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tlr3Q99MB1 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Tlr3Q99MB1 Slc6a5-201ENSMUST00000056442 7065 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tlr3Q99MB1 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tlr3Q99MB1 Gm26013-201ENSMUST00000104404 119 ntBASIC11.96□□□□□ -0.49
Tlr3Q99MB1 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC11.96□□□□□ -0.49
Tlr3Q99MB1 Gm16323-201ENSMUST00000134920 556 ntTSL 3 BASIC11.96□□□□□ -0.49
Tlr3Q99MB1 Gm24074-201ENSMUST00000158178 260 ntBASIC11.96□□□□□ -0.49
Tlr3Q99MB1 9930004E17Rik-201ENSMUST00000180031 498 ntBASIC11.96□□□□□ -0.49
Tlr3Q99MB1 D8Ertd738e-201ENSMUST00000019506 616 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Tlr3Q99MB1 Gm5298-201ENSMUST00000201122 892 ntBASIC11.96□□□□□ -0.49
Tlr3Q99MB1 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC11.96□□□□□ -0.49
Tlr3Q99MB1 6430531B16Rik-204ENSMUST00000209335 898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tlr3Q99MB1 Gm45572-201ENSMUST00000211774 750 ntTSL 5 BASIC11.96□□□□□ -0.49
Tlr3Q99MB1 Nutf2-202ENSMUST00000212042 645 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Tlr3Q99MB1 AC166341.2-201ENSMUST00000220571 120 ntBASIC11.96□□□□□ -0.49
Tlr3Q99MB1 CT010506.1-201ENSMUST00000223673 349 ntBASIC11.96□□□□□ -0.49
Tlr3Q99MB1 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tlr3Q99MB1 n-R5s211-201ENSMUST00000093689 119 ntBASIC11.96□□□□□ -0.49
Tlr3Q99MB1 2900041M22Rik-201ENSMUST00000155384 1784 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Tlr3Q99MB1 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tlr3Q99MB1 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Tlr3Q99MB1 Csf1r-202ENSMUST00000115268 4701 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tlr3Q99MB1 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Tlr3Q99MB1 Polr3e-201ENSMUST00000033173 4194 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Tlr3Q99MB1 Ldb2-204ENSMUST00000199256 2596 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 50.1 ms