Protein–RNA interactions for Protein: Q8BZT2

Sh3rf2, Putative E3 ubiquitin-protein ligase SH3RF2, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf2Q8BZT2 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Slitrk4-202ENSMUST00000114679 3513 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Samd11-201ENSMUST00000179919 2610 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Arhgap4-201ENSMUST00000064376 3353 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Rnf214-208ENSMUST00000161187 2847 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Hddc3-201ENSMUST00000032747 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Zfp689-201ENSMUST00000053392 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Slc26a11-201ENSMUST00000050880 2695 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Arvcf-202ENSMUST00000115610 3829 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Amigo3-201ENSMUST00000085060 2543 ntAPPRIS P1 BASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 AC122811.1-201ENSMUST00000222257 2921 ntBASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Sh3rf2Q8BZT2 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 Polr1b-201ENSMUST00000028874 2769 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 Acsl1-202ENSMUST00000110371 2100 ntTSL 5 BASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 Gm11578-201ENSMUST00000118530 459 ntBASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 Uckl1os-207ENSMUST00000152365 442 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 Gm17214-201ENSMUST00000164501 541 ntBASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 Gm9372-201ENSMUST00000168454 430 ntBASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 Gm17070-201ENSMUST00000170463 784 ntBASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 Wt1os-203ENSMUST00000172701 2960 ntTSL 2 BASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 Gm34379-201ENSMUST00000195036 290 ntBASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 Gm45613-201ENSMUST00000210718 443 ntTSL 3 BASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 4930431F10Rik-201ENSMUST00000213122 1157 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 AC102847.1-202ENSMUST00000226313 1245 ntBASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 CT025618.1-203ENSMUST00000227008 589 ntBASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 Larp7-201ENSMUST00000029588 2121 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 Gm5739-201ENSMUST00000208601 1703 ntBASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 Wdr45-203ENSMUST00000115688 1510 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 Tunar-201ENSMUST00000180458 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 Zfp687-201ENSMUST00000019482 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 Parp9-203ENSMUST00000114878 3548 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 Syne3-202ENSMUST00000095439 3357 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 Zfp872-201ENSMUST00000091508 1395 ntTSL 5 BASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 A130010J15Rik-204ENSMUST00000161235 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 E230029C05Rik-203ENSMUST00000208028 2066 ntBASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 Epha6-201ENSMUST00000068860 3930 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Sh3rf2Q8BZT2 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sh3rf2Q8BZT2 Ttll10-206ENSMUST00000184348 2556 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Sh3rf2Q8BZT2 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sh3rf2Q8BZT2 Ciz1-204ENSMUST00000113334 2871 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.6
Sh3rf2Q8BZT2 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Sh3rf2Q8BZT2 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sh3rf2Q8BZT2 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sh3rf2Q8BZT2 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Sh3rf2Q8BZT2 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 Npepps-201ENSMUST00000001480 4215 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 Gabrr1-201ENSMUST00000029947 2286 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 Gm3642-201ENSMUST00000166895 1762 ntAPPRIS P5 TSL 5 BASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 Gm45776-201ENSMUST00000212366 1522 ntBASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 Ltc4s-201ENSMUST00000101265 480 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 Banf2-202ENSMUST00000110032 409 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 Smim11-202ENSMUST00000118064 782 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 Gm12463-201ENSMUST00000118271 849 ntBASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 Gm15620-201ENSMUST00000122949 270 ntBASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 Ubl5-211ENSMUST00000162303 505 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Sh3rf2Q8BZT2 Gm31274-201ENSMUST00000197356 229 ntBASIC11.27□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms