Protein–RNA interactions for Protein: Q80UU2

Rpp38, Ribonuclease P protein subunit p38, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp38Q80UU2 Zscan10-201ENSMUST00000095595 2698 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rpp38Q80UU2 Kif26b-201ENSMUST00000160789 6216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rpp38Q80UU2 Tlr12-201ENSMUST00000074829 3177 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Rpp38Q80UU2 Gm43636-201ENSMUST00000201501 2235 ntBASIC11.12□□□□□ -0.63
Rpp38Q80UU2 Gm43860-201ENSMUST00000201742 2705 ntBASIC11.12□□□□□ -0.63
Rpp38Q80UU2 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rpp38Q80UU2 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Rpp38Q80UU2 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rpp38Q80UU2 Ss18l2-206ENSMUST00000215966 2316 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rpp38Q80UU2 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Rpp38Q80UU2 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rpp38Q80UU2 Ccin-201ENSMUST00000095107 1941 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Rpp38Q80UU2 Fyb2-202ENSMUST00000106804 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rpp38Q80UU2 Dcun1d3-202ENSMUST00000098080 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rpp38Q80UU2 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC11.12□□□□□ -0.63
Rpp38Q80UU2 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Rpp38Q80UU2 Gm12663-201ENSMUST00000118481 958 ntBASIC11.12□□□□□ -0.63
Rpp38Q80UU2 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Rpp38Q80UU2 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Rpp38Q80UU2 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Rpp38Q80UU2 Gm4895-201ENSMUST00000181646 1137 ntBASIC11.12□□□□□ -0.63
Rpp38Q80UU2 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC11.12□□□□□ -0.63
Rpp38Q80UU2 Gm18561-201ENSMUST00000206027 804 ntBASIC11.12□□□□□ -0.63
Rpp38Q80UU2 1700026F02Rik-203ENSMUST00000211950 1082 ntTSL 5 BASIC11.12□□□□□ -0.63
Rpp38Q80UU2 CT485607.1-201ENSMUST00000216100 85 ntBASIC11.12□□□□□ -0.63
Rpp38Q80UU2 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Rpp38Q80UU2 Scgb2b2-201ENSMUST00000038835 520 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rpp38Q80UU2 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rpp38Q80UU2 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rpp38Q80UU2 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Rpp38Q80UU2 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rpp38Q80UU2 Gtf2i-224ENSMUST00000174772 4078 ntAPPRIS ALT2 TSL 2 BASIC11.12□□□□□ -0.63
Rpp38Q80UU2 Wdr26-208ENSMUST00000162963 6452 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Rpp38Q80UU2 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rpp38Q80UU2 Sdccag8-201ENSMUST00000027785 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rpp38Q80UU2 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.12□□□□□ -0.63
Rpp38Q80UU2 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rpp38Q80UU2 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rpp38Q80UU2 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Rpp38Q80UU2 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rpp38Q80UU2 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rpp38Q80UU2 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rpp38Q80UU2 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rpp38Q80UU2 Dzip1l-201ENSMUST00000078367 3981 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rpp38Q80UU2 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC11.12□□□□□ -0.63
Rpp38Q80UU2 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Rpp38Q80UU2 AC169511.2-201ENSMUST00000226674 2063 ntBASIC11.12□□□□□ -0.63
Rpp38Q80UU2 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Rpp38Q80UU2 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC11.12□□□□□ -0.63
Rpp38Q80UU2 Epb42-201ENSMUST00000023987 2695 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Rpp38Q80UU2 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rpp38Q80UU2 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rpp38Q80UU2 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Rpp38Q80UU2 Cuzd1-201ENSMUST00000046611 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rpp38Q80UU2 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rpp38Q80UU2 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rpp38Q80UU2 Sorcs1-203ENSMUST00000164039 7241 ntAPPRIS ALT1 TSL 5 BASIC11.11□□□□□ -0.63
Rpp38Q80UU2 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rpp38Q80UU2 Srrm2-201ENSMUST00000088621 8564 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rpp38Q80UU2 Prg4-201ENSMUST00000006171 1869 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rpp38Q80UU2 Cyp2j13-202ENSMUST00000097973 1648 ntTSL 5 BASIC11.11□□□□□ -0.63
Rpp38Q80UU2 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Rpp38Q80UU2 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC11.11□□□□□ -0.63
Rpp38Q80UU2 Gm12194-201ENSMUST00000117756 1012 ntBASIC11.11□□□□□ -0.63
Rpp38Q80UU2 Gm12029-201ENSMUST00000120073 832 ntBASIC11.11□□□□□ -0.63
Rpp38Q80UU2 Gm1848-201ENSMUST00000120711 789 ntBASIC11.11□□□□□ -0.63
Rpp38Q80UU2 Gm3828-201ENSMUST00000121817 257 ntBASIC11.11□□□□□ -0.63
Rpp38Q80UU2 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC11.11□□□□□ -0.63
Rpp38Q80UU2 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC11.11□□□□□ -0.63
Rpp38Q80UU2 Gm19459-201ENSMUST00000176240 835 ntBASIC11.11□□□□□ -0.63
Rpp38Q80UU2 Gm6407-201ENSMUST00000176468 549 ntBASIC11.11□□□□□ -0.63
Rpp38Q80UU2 Gm44329-201ENSMUST00000197469 112 ntBASIC11.11□□□□□ -0.63
Rpp38Q80UU2 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rpp38Q80UU2 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC11.11□□□□□ -0.63
Rpp38Q80UU2 Gm29676-202ENSMUST00000222409 364 ntTSL 2 BASIC11.11□□□□□ -0.63
Rpp38Q80UU2 AC129975.1-201ENSMUST00000224816 592 ntBASIC11.11□□□□□ -0.63
Rpp38Q80UU2 Lgi3-203ENSMUST00000226548 1001 ntBASIC11.11□□□□□ -0.63
Rpp38Q80UU2 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Rpp38Q80UU2 Gm25580-201ENSMUST00000083409 327 ntBASIC11.11□□□□□ -0.63
Rpp38Q80UU2 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC11.11□□□□□ -0.63
Rpp38Q80UU2 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rpp38Q80UU2 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Rpp38Q80UU2 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Rpp38Q80UU2 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rpp38Q80UU2 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rpp38Q80UU2 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rpp38Q80UU2 Filip1l-202ENSMUST00000159414 3253 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Rpp38Q80UU2 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.11□□□□□ -0.63
Rpp38Q80UU2 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC11.11□□□□□ -0.63
Rpp38Q80UU2 Nono-201ENSMUST00000033673 2562 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rpp38Q80UU2 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC11.11□□□□□ -0.63
Rpp38Q80UU2 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rpp38Q80UU2 Rps6ka1-209ENSMUST00000174481 2228 ntTSL 5 BASIC11.11□□□□□ -0.63
Rpp38Q80UU2 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rpp38Q80UU2 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Rpp38Q80UU2 Olfr5-202ENSMUST00000209866 2980 ntAPPRIS P1 TSL 5 BASIC11.1□□□□□ -0.63
Rpp38Q80UU2 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rpp38Q80UU2 Gm29684-201ENSMUST00000220248 1982 ntTSL 1 (best) BASIC11.1□□□□□ -0.63
Rpp38Q80UU2 Prkcd-201ENSMUST00000022521 2612 ntAPPRIS ALT2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Rpp38Q80UU2 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC11.1□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms