Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Scamp2-201ENSMUST00000045791 2340 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smarcd3Q6P9Z1 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Smarcd3Q6P9Z1 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Smarcd3Q6P9Z1 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Smarcd3Q6P9Z1 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.77
Smarcd3Q6P9Z1 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Smarcd3Q6P9Z1 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Smarcd3Q6P9Z1 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Smarcd3Q6P9Z1 Gm12579-201ENSMUST00000118040 783 ntBASIC10.21□□□□□ -0.77
Smarcd3Q6P9Z1 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC10.21□□□□□ -0.77
Smarcd3Q6P9Z1 Gm12501-201ENSMUST00000119163 529 ntBASIC10.21□□□□□ -0.77
Smarcd3Q6P9Z1 Asb8-202ENSMUST00000123626 1100 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smarcd3Q6P9Z1 Asb8-203ENSMUST00000123922 1162 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.77
Smarcd3Q6P9Z1 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smarcd3Q6P9Z1 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Smarcd3Q6P9Z1 Ighv1-48-201ENSMUST00000191795 294 ntBASIC10.21□□□□□ -0.77
Smarcd3Q6P9Z1 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC10.21□□□□□ -0.77
Smarcd3Q6P9Z1 Gm18056-201ENSMUST00000207670 568 ntBASIC10.21□□□□□ -0.77
Smarcd3Q6P9Z1 Gm18061-201ENSMUST00000208350 562 ntBASIC10.21□□□□□ -0.77
Smarcd3Q6P9Z1 Gm18063-201ENSMUST00000208529 568 ntBASIC10.21□□□□□ -0.77
Smarcd3Q6P9Z1 Gm18052-201ENSMUST00000208750 559 ntBASIC10.21□□□□□ -0.77
Smarcd3Q6P9Z1 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC10.21□□□□□ -0.77
Smarcd3Q6P9Z1 AC125070.1-201ENSMUST00000223523 555 ntTSL 5 BASIC10.21□□□□□ -0.77
Smarcd3Q6P9Z1 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Smarcd3Q6P9Z1 Gm21811-201ENSMUST00000096485 930 ntBASIC10.21□□□□□ -0.77
Smarcd3Q6P9Z1 Cmya5-201ENSMUST00000062122 11850 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Smarcd3Q6P9Z1 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC10.21□□□□□ -0.78
Smarcd3Q6P9Z1 Trappc9-202ENSMUST00000089770 4047 ntAPPRIS P4 TSL 1 (best) BASIC10.21□□□□□ -0.78
Smarcd3Q6P9Z1 Plscr3-203ENSMUST00000108633 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Smarcd3Q6P9Z1 Rfesd-201ENSMUST00000050997 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Smarcd3Q6P9Z1 Gm5171-201ENSMUST00000214944 1415 ntBASIC10.21□□□□□ -0.78
Smarcd3Q6P9Z1 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
Smarcd3Q6P9Z1 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Smarcd3Q6P9Z1 Bcl9-201ENSMUST00000046521 6102 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Smarcd3Q6P9Z1 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
Smarcd3Q6P9Z1 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
Smarcd3Q6P9Z1 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
Smarcd3Q6P9Z1 Vwa5b1-201ENSMUST00000030533 7486 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Smarcd3Q6P9Z1 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Smarcd3Q6P9Z1 Gtf2i-219ENSMUST00000174155 4141 ntAPPRIS P4 TSL 2 BASIC10.21□□□□□ -0.78
Smarcd3Q6P9Z1 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Smarcd3Q6P9Z1 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Smarcd3Q6P9Z1 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Smarcd3Q6P9Z1 Megf10-201ENSMUST00000075770 7514 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Smarcd3Q6P9Z1 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC10.21□□□□□ -0.78
Smarcd3Q6P9Z1 Dok4-204ENSMUST00000212810 2558 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Smarcd3Q6P9Z1 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Nrap-202ENSMUST00000073536 5501 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 AI593442-201ENSMUST00000098768 5615 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Ablim2-204ENSMUST00000114204 2953 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Aplp2-202ENSMUST00000079758 3504 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Gm33366-201ENSMUST00000195583 3827 ntBASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Angel1-201ENSMUST00000021682 3850 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Olfr1349-206ENSMUST00000213656 4492 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Adcy7-202ENSMUST00000168545 5937 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Eno3-202ENSMUST00000108548 1564 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Nphs1-203ENSMUST00000126297 3877 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Gm16341-201ENSMUST00000126385 377 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Dnajb6-202ENSMUST00000012734 1024 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Inpp4a-208ENSMUST00000137266 2934 ntTSL 5 BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Gm29499-201ENSMUST00000189151 486 ntBASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Gm28329-201ENSMUST00000191208 689 ntBASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Gm29171-201ENSMUST00000191397 486 ntBASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Pcdhga7-201ENSMUST00000192511 4730 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Gm4959-201ENSMUST00000197271 1044 ntBASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Gm19040-201ENSMUST00000203280 4726 ntBASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Gm8342-201ENSMUST00000209839 757 ntBASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Nmt1-201ENSMUST00000021314 4861 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 AC153830.1-201ENSMUST00000218522 594 ntTSL 5 BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 CT009713.8-202ENSMUST00000224732 385 ntBASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Smarcd3Q6P9Z1 Olfr411-201ENSMUST00000080365 1049 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms