Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Plekhg5-203ENSMUST00000105662 3933 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
Vps54Q5SPW0 Slc37a4-202ENSMUST00000213268 1353 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.27
Vps54Q5SPW0 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps54Q5SPW0 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps54Q5SPW0 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps54Q5SPW0 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Vps54Q5SPW0 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps54Q5SPW0 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps54Q5SPW0 Gm43963-201ENSMUST00000203466 2488 ntBASIC13.33□□□□□ -0.28
Vps54Q5SPW0 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vps54Q5SPW0 Colec11-201ENSMUST00000036136 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps54Q5SPW0 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Vps54Q5SPW0 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC13.33□□□□□ -0.28
Vps54Q5SPW0 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps54Q5SPW0 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps54Q5SPW0 Ss18-202ENSMUST00000040964 4153 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vps54Q5SPW0 Gm11422-201ENSMUST00000118925 1103 ntBASIC13.33□□□□□ -0.28
Vps54Q5SPW0 Gm13703-201ENSMUST00000150705 449 ntTSL 2 BASIC13.33□□□□□ -0.28
Vps54Q5SPW0 Gm45716-203ENSMUST00000153734 644 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Vps54Q5SPW0 Gm16165-201ENSMUST00000160140 795 ntBASIC13.33□□□□□ -0.28
Vps54Q5SPW0 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC13.33□□□□□ -0.28
Vps54Q5SPW0 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC13.33□□□□□ -0.28
Vps54Q5SPW0 Gm19927-201ENSMUST00000185792 781 ntBASIC13.33□□□□□ -0.28
Vps54Q5SPW0 Gm29431-201ENSMUST00000189848 449 ntTSL 5 BASIC13.33□□□□□ -0.28
Vps54Q5SPW0 Ptbp2-210ENSMUST00000198403 389 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vps54Q5SPW0 Gm43667-201ENSMUST00000198616 1095 ntBASIC13.33□□□□□ -0.28
Vps54Q5SPW0 Gm45338-201ENSMUST00000209198 820 ntTSL 5 BASIC13.33□□□□□ -0.28
Vps54Q5SPW0 CT030653.1-201ENSMUST00000224382 1279 ntBASIC13.33□□□□□ -0.28
Vps54Q5SPW0 AC115304.2-201ENSMUST00000226399 332 ntBASIC13.33□□□□□ -0.28
Vps54Q5SPW0 CT025618.1-203ENSMUST00000227008 589 ntBASIC13.33□□□□□ -0.28
Vps54Q5SPW0 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps54Q5SPW0 Gm10135-201ENSMUST00000043711 252 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Vps54Q5SPW0 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Vps54Q5SPW0 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Vps54Q5SPW0 Cwc25-202ENSMUST00000107579 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps54Q5SPW0 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.28
Vps54Q5SPW0 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vps54Q5SPW0 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps54Q5SPW0 Gm17745-201ENSMUST00000212186 1692 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Vps54Q5SPW0 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps54Q5SPW0 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Vps54Q5SPW0 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps54Q5SPW0 Gm20671-201ENSMUST00000144673 1731 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Vps54Q5SPW0 Slc10a1-202ENSMUST00000218162 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps54Q5SPW0 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps54Q5SPW0 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC13.33□□□□□ -0.28
Vps54Q5SPW0 Mob3b-201ENSMUST00000102975 6030 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Vps54Q5SPW0 2900026A02Rik-203ENSMUST00000212276 5864 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Vps54Q5SPW0 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Vps54Q5SPW0 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Vps54Q5SPW0 Nlrp6-201ENSMUST00000106045 3823 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Vps54Q5SPW0 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps54Q5SPW0 Fntb-201ENSMUST00000041008 2613 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps54Q5SPW0 Slc38a3-209ENSMUST00000193932 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps54Q5SPW0 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps54Q5SPW0 BC052040-201ENSMUST00000110918 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps54Q5SPW0 Pyurf-201ENSMUST00000053386 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps54Q5SPW0 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Vps54Q5SPW0 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps54Q5SPW0 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps54Q5SPW0 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps54Q5SPW0 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps54Q5SPW0 AU015836-201ENSMUST00000120624 674 ntTSL 3 BASIC13.32□□□□□ -0.28
Vps54Q5SPW0 Gm12705-201ENSMUST00000129460 872 ntTSL 2 BASIC13.32□□□□□ -0.28
Vps54Q5SPW0 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC13.32□□□□□ -0.28
Vps54Q5SPW0 AC238811.4-201ENSMUST00000178019 1246 ntBASIC13.32□□□□□ -0.28
Vps54Q5SPW0 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC13.32□□□□□ -0.28
Vps54Q5SPW0 AC238940.3-201ENSMUST00000178830 1246 ntBASIC13.32□□□□□ -0.28
Vps54Q5SPW0 Gm26976-201ENSMUST00000182929 908 ntBASIC13.32□□□□□ -0.28
Vps54Q5SPW0 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps54Q5SPW0 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC13.32□□□□□ -0.28
Vps54Q5SPW0 Gm18539-201ENSMUST00000204745 1090 ntBASIC13.32□□□□□ -0.28
Vps54Q5SPW0 Gm3028-201ENSMUST00000213805 1119 ntBASIC13.32□□□□□ -0.28
Vps54Q5SPW0 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps54Q5SPW0 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps54Q5SPW0 Gm5805-201ENSMUST00000072779 456 ntBASIC13.32□□□□□ -0.28
Vps54Q5SPW0 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps54Q5SPW0 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps54Q5SPW0 Bcl2-202ENSMUST00000189999 2841 ntBASIC13.32□□□□□ -0.28
Vps54Q5SPW0 Nphs1os-201ENSMUST00000152625 1339 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps54Q5SPW0 AC124732.3-201ENSMUST00000221835 1765 ntBASIC13.32□□□□□ -0.28
Vps54Q5SPW0 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
Vps54Q5SPW0 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Vps54Q5SPW0 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Vps54Q5SPW0 Pfkfb3-202ENSMUST00000049849 2076 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Vps54Q5SPW0 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC13.31□□□□□ -0.28
Vps54Q5SPW0 Plxnb2-201ENSMUST00000060808 6394 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Vps54Q5SPW0 Dync1i2-201ENSMUST00000081710 2631 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps54Q5SPW0 Rpap1-202ENSMUST00000099529 4813 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps54Q5SPW0 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps54Q5SPW0 Unkl-201ENSMUST00000015271 3414 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vps54Q5SPW0 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Vps54Q5SPW0 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC13.31□□□□□ -0.28
Vps54Q5SPW0 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps54Q5SPW0 Gm46430-201ENSMUST00000220478 1989 ntTSL 3 BASIC13.31□□□□□ -0.28
Vps54Q5SPW0 Timeless-201ENSMUST00000055539 4457 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps54Q5SPW0 Dab2-203ENSMUST00000110663 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps54Q5SPW0 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vps54Q5SPW0 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC13.31□□□□□ -0.28
Vps54Q5SPW0 Clec12b-201ENSMUST00000032261 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 47.7 ms