Protein–RNA interactions for Protein: Q3UJB0

Sf3b2, Splicing factor 3b, subunit 2, mousemouse

Known RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b2Q3UJB0 Psme2-201ENSMUST00000111378 795 ntTSL 5 BASIC14.43□□□□□ -0.1
Sf3b2Q3UJB0 Rpl7a-ps12-201ENSMUST00000120384 794 ntBASIC14.43□□□□□ -0.1
Sf3b2Q3UJB0 Shf-205ENSMUST00000121237 882 ntTSL 3 BASIC14.43□□□□□ -0.1
Sf3b2Q3UJB0 Gm15373-201ENSMUST00000121495 214 ntBASIC14.43□□□□□ -0.1
Sf3b2Q3UJB0 Gm15793-201ENSMUST00000121857 495 ntBASIC14.43□□□□□ -0.1
Sf3b2Q3UJB0 Gm13027-201ENSMUST00000135858 241 ntTSL 5 BASIC14.43□□□□□ -0.1
Sf3b2Q3UJB0 1700095B10Rik-201ENSMUST00000182349 978 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b2Q3UJB0 Gm8824-201ENSMUST00000182962 990 ntBASIC14.43□□□□□ -0.1
Sf3b2Q3UJB0 Ighv5-1-201ENSMUST00000193324 353 ntBASIC14.43□□□□□ -0.1
Sf3b2Q3UJB0 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC14.43□□□□□ -0.1
Sf3b2Q3UJB0 Gm44540-201ENSMUST00000205640 354 ntBASIC14.43□□□□□ -0.1
Sf3b2Q3UJB0 Olfr209-202ENSMUST00000208246 428 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b2Q3UJB0 Gm19228-201ENSMUST00000214030 717 ntBASIC14.43□□□□□ -0.1
Sf3b2Q3UJB0 Gm34667-201ENSMUST00000222974 1258 ntTSL 5 BASIC14.43□□□□□ -0.1
Sf3b2Q3UJB0 Hesx1-202ENSMUST00000224331 983 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Sf3b2Q3UJB0 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b2Q3UJB0 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b2Q3UJB0 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b2Q3UJB0 Ikbkg-205ENSMUST00000114129 2222 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b2Q3UJB0 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b2Q3UJB0 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b2Q3UJB0 Mbnl2-208ENSMUST00000227594 2334 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Sf3b2Q3UJB0 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b2Q3UJB0 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Sf3b2Q3UJB0 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b2Q3UJB0 Ly6e-210ENSMUST00000188866 2068 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Sf3b2Q3UJB0 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b2Q3UJB0 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b2Q3UJB0 Gm37122-201ENSMUST00000195313 1567 ntBASIC14.43□□□□□ -0.1
Sf3b2Q3UJB0 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Sf3b2Q3UJB0 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Sf3b2Q3UJB0 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Sf3b2Q3UJB0 Gm10537-201ENSMUST00000192625 1698 ntBASIC14.42□□□□□ -0.1
Sf3b2Q3UJB0 Ms4a6b-201ENSMUST00000025580 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b2Q3UJB0 Fcrla-201ENSMUST00000046322 1679 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b2Q3UJB0 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC14.42□□□□□ -0.1
Sf3b2Q3UJB0 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b2Q3UJB0 Ms4a7-203ENSMUST00000067532 1334 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b2Q3UJB0 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Sf3b2Q3UJB0 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b2Q3UJB0 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b2Q3UJB0 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Sf3b2Q3UJB0 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC14.42□□□□□ -0.1
Sf3b2Q3UJB0 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b2Q3UJB0 Fam160b2-201ENSMUST00000022690 4033 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Sf3b2Q3UJB0 Th-202ENSMUST00000105929 1950 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b2Q3UJB0 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Sf3b2Q3UJB0 Chrdl1-204ENSMUST00000166406 2605 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b2Q3UJB0 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b2Q3UJB0 Capns1-202ENSMUST00000108196 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b2Q3UJB0 Ywhaq-ps3-201ENSMUST00000120944 738 ntBASIC14.42□□□□□ -0.1
Sf3b2Q3UJB0 Nrg4-204ENSMUST00000130158 1000 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Sf3b2Q3UJB0 Gm13857-201ENSMUST00000139645 173 ntBASIC14.42□□□□□ -0.1
Sf3b2Q3UJB0 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b2Q3UJB0 Gm3115-202ENSMUST00000177660 618 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Sf3b2Q3UJB0 Gm6337-203ENSMUST00000177662 618 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Sf3b2Q3UJB0 Gm3727-202ENSMUST00000178251 618 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Sf3b2Q3UJB0 Mir124-2hg-203ENSMUST00000186923 673 ntTSL 3 BASIC14.42□□□□□ -0.1
Sf3b2Q3UJB0 Gm21631-201ENSMUST00000195041 754 ntBASIC14.42□□□□□ -0.1
Sf3b2Q3UJB0 Gm6859-201ENSMUST00000218614 989 ntBASIC14.42□□□□□ -0.1
Sf3b2Q3UJB0 Srd5a3-203ENSMUST00000113507 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b2Q3UJB0 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b2Q3UJB0 Tardbp-210ENSMUST00000172073 6513 ntTSL 5 BASIC14.42□□□□□ -0.1
Sf3b2Q3UJB0 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b2Q3UJB0 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Sf3b2Q3UJB0 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b2Q3UJB0 Lsamp-208ENSMUST00000189358 2766 ntTSL 5 BASIC14.42□□□□□ -0.1
Sf3b2Q3UJB0 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b2Q3UJB0 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b2Q3UJB0 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b2Q3UJB0 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b2Q3UJB0 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b2Q3UJB0 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b2Q3UJB0 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b2Q3UJB0 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Sf3b2Q3UJB0 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b2Q3UJB0 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b2Q3UJB0 Pabpc1l-201ENSMUST00000067715 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b2Q3UJB0 Plekhg5-202ENSMUST00000105661 3842 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b2Q3UJB0 Plekhg5-204ENSMUST00000118648 3818 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Sf3b2Q3UJB0 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b2Q3UJB0 Gm15987-201ENSMUST00000141700 2231 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b2Q3UJB0 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b2Q3UJB0 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Sf3b2Q3UJB0 Ighv14-3-201ENSMUST00000103469 399 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Sf3b2Q3UJB0 Paip2-202ENSMUST00000115734 815 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Sf3b2Q3UJB0 Rpl7a-ps11-201ENSMUST00000118791 801 ntBASIC14.41□□□□□ -0.1
Sf3b2Q3UJB0 Gm12435-201ENSMUST00000118949 1016 ntBASIC14.41□□□□□ -0.1
Sf3b2Q3UJB0 Gm12668-201ENSMUST00000134966 575 ntTSL 3 BASIC14.41□□□□□ -0.1
Sf3b2Q3UJB0 Atp5e-201ENSMUST00000016396 421 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b2Q3UJB0 Anp32e-206ENSMUST00000169426 915 ntTSL 5 BASIC14.41□□□□□ -0.1
Sf3b2Q3UJB0 Dusp3-207ENSMUST00000176261 496 ntTSL 3 BASIC14.41□□□□□ -0.1
Sf3b2Q3UJB0 Gm33969-201ENSMUST00000197615 388 ntTSL 3 BASIC14.41□□□□□ -0.1
Sf3b2Q3UJB0 Gm5291-201ENSMUST00000201965 899 ntBASIC14.41□□□□□ -0.1
Sf3b2Q3UJB0 Tcl1b1-202ENSMUST00000222342 664 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Sf3b2Q3UJB0 AC153153.1-201ENSMUST00000225803 793 ntBASIC14.41□□□□□ -0.1
Sf3b2Q3UJB0 AC159006.3-201ENSMUST00000226918 664 ntBASIC14.41□□□□□ -0.1
Sf3b2Q3UJB0 Rps14-201ENSMUST00000025511 683 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Sf3b2Q3UJB0 Gm9531-201ENSMUST00000055820 638 ntTSL 3 BASIC14.41□□□□□ -0.1
Sf3b2Q3UJB0 Gm16477-201ENSMUST00000085365 801 ntBASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 39.1 ms