Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf1Q07802 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf1Q07802 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf1Q07802 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf1Q07802 Trpv3-201ENSMUST00000049676 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf1Q07802 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf1Q07802 Gm44190-201ENSMUST00000205083 1401 ntBASIC11.34□□□□□ -0.59
Ebf1Q07802 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.34□□□□□ -0.59
Ebf1Q07802 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf1Q07802 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC11.34□□□□□ -0.59
Ebf1Q07802 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf1Q07802 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
Ebf1Q07802 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
Ebf1Q07802 4933406M09Rik-201ENSMUST00000162187 1768 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.59
Ebf1Q07802 Bpgm-201ENSMUST00000045372 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.59
Ebf1Q07802 Ppp1r18-201ENSMUST00000113814 3131 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf1Q07802 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Ebf1Q07802 Lexm-202ENSMUST00000106788 1569 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf1Q07802 Corin-207ENSMUST00000177290 2943 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Ebf1Q07802 Tmem138-201ENSMUST00000025568 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf1Q07802 Ttc30b-201ENSMUST00000099996 2737 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Ebf1Q07802 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf1Q07802 A430033K04Rik-203ENSMUST00000198958 2264 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf1Q07802 Morf4l2-204ENSMUST00000113097 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf1Q07802 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf1Q07802 Lck-201ENSMUST00000067240 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf1Q07802 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.33□□□□□ -0.6
Ebf1Q07802 Asph-202ENSMUST00000078139 6694 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf1Q07802 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf1Q07802 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf1Q07802 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Ebf1Q07802 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC11.33□□□□□ -0.6
Ebf1Q07802 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC11.33□□□□□ -0.6
Ebf1Q07802 Gm12663-201ENSMUST00000118481 958 ntBASIC11.33□□□□□ -0.6
Ebf1Q07802 Anxa8-202ENSMUST00000120077 1208 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf1Q07802 Gm12453-201ENSMUST00000121981 331 ntBASIC11.33□□□□□ -0.6
Ebf1Q07802 Gm13530-201ENSMUST00000134014 390 ntTSL 2 BASIC11.33□□□□□ -0.6
Ebf1Q07802 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC11.33□□□□□ -0.6
Ebf1Q07802 Gm5870-201ENSMUST00000196461 282 ntBASIC11.33□□□□□ -0.6
Ebf1Q07802 4933402C05Rik-201ENSMUST00000208189 1035 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf1Q07802 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC11.33□□□□□ -0.6
Ebf1Q07802 Gm18065-201ENSMUST00000221395 526 ntBASIC11.33□□□□□ -0.6
Ebf1Q07802 Gm26670-202ENSMUST00000226862 340 ntBASIC11.33□□□□□ -0.6
Ebf1Q07802 Olfr1395-201ENSMUST00000059379 954 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Ebf1Q07802 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
Ebf1Q07802 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC11.33□□□□□ -0.6
Ebf1Q07802 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf1Q07802 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf1Q07802 Srsf6-203ENSMUST00000130411 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf1Q07802 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf1Q07802 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf1Q07802 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf1Q07802 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
Ebf1Q07802 Trim45-201ENSMUST00000037409 4612 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf1Q07802 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf1Q07802 Recql4-201ENSMUST00000036852 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf1Q07802 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf1Q07802 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf1Q07802 Cars-201ENSMUST00000010899 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf1Q07802 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf1Q07802 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf1Q07802 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Ebf1Q07802 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.33□□□□□ -0.6
Ebf1Q07802 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC11.33□□□□□ -0.6
Ebf1Q07802 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.33□□□□□ -0.6
Ebf1Q07802 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf1Q07802 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf1Q07802 Xpnpep1-211ENSMUST00000183274 2120 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf1Q07802 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Ebf1Q07802 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Ebf1Q07802 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf1Q07802 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf1Q07802 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf1Q07802 Galnt9-202ENSMUST00000165856 1541 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf1Q07802 Tube1-201ENSMUST00000019991 2929 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf1Q07802 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf1Q07802 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf1Q07802 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf1Q07802 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf1Q07802 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf1Q07802 Gm8111-201ENSMUST00000117659 987 ntBASIC11.32□□□□□ -0.6
Ebf1Q07802 Nhp2-202ENSMUST00000127405 1042 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf1Q07802 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf1Q07802 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf1Q07802 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf1Q07802 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Ebf1Q07802 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Ebf1Q07802 Gm21778-201ENSMUST00000178779 471 ntBASIC11.32□□□□□ -0.6
Ebf1Q07802 Mir6941-201ENSMUST00000184711 59 ntBASIC11.32□□□□□ -0.6
Ebf1Q07802 Gm44216-201ENSMUST00000203942 157 ntBASIC11.32□□□□□ -0.6
Ebf1Q07802 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC11.32□□□□□ -0.6
Ebf1Q07802 Gm45856-201ENSMUST00000212752 416 ntBASIC11.32□□□□□ -0.6
Ebf1Q07802 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC11.32□□□□□ -0.6
Ebf1Q07802 BC106175-202ENSMUST00000219344 1213 ntBASIC11.32□□□□□ -0.6
Ebf1Q07802 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf1Q07802 Olfr538-201ENSMUST00000084457 933 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
Ebf1Q07802 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf1Q07802 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf1Q07802 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Ebf1Q07802 Chl1-204ENSMUST00000203912 4628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms