Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Gm7642-201ENSMUST00000216345 1809 ntBASIC9.93□□□□□ -0.82
H3f3aP84244 Adamts9-201ENSMUST00000113438 8016 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
H3f3aP84244 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
H3f3aP84244 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
H3f3aP84244 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
H3f3aP84244 Emc1-201ENSMUST00000042096 4706 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
H3f3aP84244 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
H3f3aP84244 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
H3f3aP84244 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
H3f3aP84244 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
H3f3aP84244 Fut4-201ENSMUST00000061498 4074 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
H3f3aP84244 Lrrc74b-203ENSMUST00000100123 2231 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
H3f3aP84244 Gm26846-201ENSMUST00000181865 4869 ntTSL 5 BASIC9.93□□□□□ -0.82
H3f3aP84244 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
H3f3aP84244 Pcdhga10-201ENSMUST00000193404 4732 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
H3f3aP84244 Gm11451-201ENSMUST00000118946 630 ntBASIC9.93□□□□□ -0.82
H3f3aP84244 Gm1848-201ENSMUST00000120711 789 ntBASIC9.93□□□□□ -0.82
H3f3aP84244 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
H3f3aP84244 Gm4917-201ENSMUST00000121452 650 ntBASIC9.93□□□□□ -0.82
H3f3aP84244 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC9.93□□□□□ -0.82
H3f3aP84244 Smim1-204ENSMUST00000130175 477 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
H3f3aP84244 Smim1-206ENSMUST00000132541 490 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
H3f3aP84244 Gm16308-201ENSMUST00000162171 940 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
H3f3aP84244 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
H3f3aP84244 Tmem40-206ENSMUST00000170625 843 ntAPPRIS ALT2 TSL 3 BASIC9.93□□□□□ -0.82
H3f3aP84244 Gm9639-201ENSMUST00000172205 678 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
H3f3aP84244 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC9.93□□□□□ -0.82
H3f3aP84244 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
H3f3aP84244 Gm3508-201ENSMUST00000186012 792 ntBASIC9.93□□□□□ -0.82
H3f3aP84244 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC9.93□□□□□ -0.82
H3f3aP84244 Gm5302-201ENSMUST00000202130 796 ntBASIC9.93□□□□□ -0.82
H3f3aP84244 Cldnd2-202ENSMUST00000206839 583 ntAPPRIS P1 TSL 2 BASIC9.93□□□□□ -0.82
H3f3aP84244 Gm5599-201ENSMUST00000209602 788 ntBASIC9.93□□□□□ -0.82
H3f3aP84244 Gm3285-201ENSMUST00000218443 908 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
H3f3aP84244 CT009527.1-201ENSMUST00000224205 339 ntBASIC9.93□□□□□ -0.82
H3f3aP84244 AC156501.1-201ENSMUST00000228219 270 ntBASIC9.93□□□□□ -0.82
H3f3aP84244 AC135114.1-201ENSMUST00000228682 270 ntBASIC9.93□□□□□ -0.82
H3f3aP84244 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
H3f3aP84244 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
H3f3aP84244 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC9.93□□□□□ -0.82
H3f3aP84244 AC153506.1-201ENSMUST00000218768 2915 ntBASIC9.93□□□□□ -0.82
H3f3aP84244 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
H3f3aP84244 Gm5124-202ENSMUST00000132683 2083 ntBASIC9.93□□□□□ -0.82
H3f3aP84244 Gm15958-202ENSMUST00000153479 2087 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
H3f3aP84244 Phactr1-201ENSMUST00000066928 2013 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
H3f3aP84244 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC9.93□□□□□ -0.82
H3f3aP84244 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
H3f3aP84244 Smtn-210ENSMUST00000170588 3386 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
H3f3aP84244 Pip5k1b-201ENSMUST00000025800 2573 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
H3f3aP84244 Cit-202ENSMUST00000102560 6213 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
H3f3aP84244 Gm29358-202ENSMUST00000187941 3227 ntBASIC9.93□□□□□ -0.82
H3f3aP84244 Cpeb1-209ENSMUST00000178892 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
H3f3aP84244 Slc38a3-202ENSMUST00000167868 3151 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
H3f3aP84244 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
H3f3aP84244 Bco1-202ENSMUST00000167370 1747 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
H3f3aP84244 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
H3f3aP84244 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
H3f3aP84244 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
H3f3aP84244 4933407I05Rik-204ENSMUST00000217562 1561 ntBASIC9.92□□□□□ -0.82
H3f3aP84244 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
H3f3aP84244 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC9.92□□□□□ -0.82
H3f3aP84244 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
H3f3aP84244 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
H3f3aP84244 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
H3f3aP84244 AC169511.2-201ENSMUST00000226674 2063 ntBASIC9.92□□□□□ -0.82
H3f3aP84244 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
H3f3aP84244 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
H3f3aP84244 Htr2c-202ENSMUST00000096299 4883 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
H3f3aP84244 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
H3f3aP84244 Robo1-201ENSMUST00000023600 7563 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
H3f3aP84244 Pcdhb21-201ENSMUST00000061405 4705 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
H3f3aP84244 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
H3f3aP84244 Igf1-207ENSMUST00000122386 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
H3f3aP84244 Gm43522-201ENSMUST00000196697 1922 ntBASIC9.92□□□□□ -0.82
H3f3aP84244 Myocd-203ENSMUST00000108695 5114 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
H3f3aP84244 Far2-201ENSMUST00000032443 3480 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
H3f3aP84244 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC9.92□□□□□ -0.82
H3f3aP84244 Zcchc8-204ENSMUST00000196282 4350 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
H3f3aP84244 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
H3f3aP84244 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
H3f3aP84244 Hist1h3d-201ENSMUST00000105105 1249 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
H3f3aP84244 Ssc4d-202ENSMUST00000111150 459 ntTSL 2 BASIC9.92□□□□□ -0.82
H3f3aP84244 Gm8876-201ENSMUST00000120768 1122 ntBASIC9.92□□□□□ -0.82
H3f3aP84244 Gm12516-201ENSMUST00000120819 385 ntBASIC9.92□□□□□ -0.82
H3f3aP84244 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
H3f3aP84244 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
H3f3aP84244 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC9.92□□□□□ -0.82
H3f3aP84244 Gm25554-201ENSMUST00000158075 113 ntBASIC9.92□□□□□ -0.82
H3f3aP84244 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC9.92□□□□□ -0.82
H3f3aP84244 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC9.92□□□□□ -0.82
H3f3aP84244 Gm3786-201ENSMUST00000202659 378 ntBASIC9.92□□□□□ -0.82
H3f3aP84244 Gm18539-201ENSMUST00000204745 1090 ntBASIC9.92□□□□□ -0.82
H3f3aP84244 Gm44126-201ENSMUST00000204831 514 ntBASIC9.92□□□□□ -0.82
H3f3aP84244 Cox6b1-204ENSMUST00000208838 354 ntTSL 3 BASIC9.92□□□□□ -0.82
H3f3aP84244 Gm45285-201ENSMUST00000210418 749 ntTSL 3 BASIC9.92□□□□□ -0.82
H3f3aP84244 Gm4065-202ENSMUST00000218911 986 ntTSL 3 BASIC9.92□□□□□ -0.82
H3f3aP84244 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC9.92□□□□□ -0.82
H3f3aP84244 Gm6685-201ENSMUST00000042595 764 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
H3f3aP84244 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
H3f3aP84244 Krtap4-2-201ENSMUST00000058987 974 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms