Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Ptgr2-207ENSMUST00000146377 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgb1P63158 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgb1P63158 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgb1P63158 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC12.32□□□□□ -0.44
Hmgb1P63158 Pdp2-201ENSMUST00000059588 5692 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgb1P63158 Entpd8-201ENSMUST00000044078 2299 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgb1P63158 Brat1-202ENSMUST00000100505 3431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgb1P63158 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgb1P63158 Rgs12-203ENSMUST00000114280 2777 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgb1P63158 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC12.32□□□□□ -0.44
Hmgb1P63158 Triobp-204ENSMUST00000109690 7023 ntAPPRIS P4 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgb1P63158 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Hmgb1P63158 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Hmgb1P63158 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgb1P63158 Ly75-201ENSMUST00000028362 5172 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgb1P63158 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgb1P63158 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Hmgb1P63158 A130071D04Rik-201ENSMUST00000194467 5864 ntBASIC12.32□□□□□ -0.44
Hmgb1P63158 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgb1P63158 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgb1P63158 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgb1P63158 Neu2-206ENSMUST00000166259 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgb1P63158 Gm43411-201ENSMUST00000196235 1579 ntBASIC12.31□□□□□ -0.44
Hmgb1P63158 Gm18198-201ENSMUST00000204986 1551 ntBASIC12.31□□□□□ -0.44
Hmgb1P63158 4921524J17Rik-201ENSMUST00000047749 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgb1P63158 Arhgef7-203ENSMUST00000098938 4628 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgb1P63158 Mthfr-202ENSMUST00000097788 2652 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgb1P63158 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgb1P63158 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgb1P63158 Rbbp5-202ENSMUST00000187505 1977 ntTSL 5 BASIC12.31□□□□□ -0.44
Hmgb1P63158 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Hmgb1P63158 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgb1P63158 Srp54a-207ENSMUST00000110708 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgb1P63158 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC12.31□□□□□ -0.44
Hmgb1P63158 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgb1P63158 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.31□□□□□ -0.44
Hmgb1P63158 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgb1P63158 U2af1l4-234ENSMUST00000171850 564 ntTSL 5 BASIC12.31□□□□□ -0.44
Hmgb1P63158 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC12.31□□□□□ -0.44
Hmgb1P63158 8030442B05Rik-201ENSMUST00000192626 1035 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgb1P63158 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC12.31□□□□□ -0.44
Hmgb1P63158 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC12.31□□□□□ -0.44
Hmgb1P63158 Gm5369-201ENSMUST00000217499 588 ntBASIC12.31□□□□□ -0.44
Hmgb1P63158 AC124171.1-201ENSMUST00000221151 567 ntTSL 5 BASIC12.31□□□□□ -0.44
Hmgb1P63158 CT009546.1-201ENSMUST00000222573 1120 ntBASIC12.31□□□□□ -0.44
Hmgb1P63158 CT573047.1-201ENSMUST00000223652 851 ntBASIC12.31□□□□□ -0.44
Hmgb1P63158 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgb1P63158 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgb1P63158 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgb1P63158 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Hmgb1P63158 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgb1P63158 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC12.31□□□□□ -0.44
Hmgb1P63158 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgb1P63158 Olfr463-202ENSMUST00000215150 2031 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Hmgb1P63158 Gm43972-201ENSMUST00000181398 1467 ntBASIC12.31□□□□□ -0.44
Hmgb1P63158 Pcdh18-201ENSMUST00000035931 5168 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgb1P63158 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgb1P63158 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgb1P63158 Rdh11-201ENSMUST00000085254 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgb1P63158 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgb1P63158 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Hmgb1P63158 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgb1P63158 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgb1P63158 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgb1P63158 Tfpi2-201ENSMUST00000031674 1530 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgb1P63158 Fam234b-201ENSMUST00000111915 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgb1P63158 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Hmgb1P63158 Tnc-203ENSMUST00000107372 7106 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Hmgb1P63158 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Hmgb1P63158 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC12.31□□□□□ -0.44
Hmgb1P63158 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Hmgb1P63158 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Hmgb1P63158 Gm9915-201ENSMUST00000066196 1383 ntBASIC12.3□□□□□ -0.44
Hmgb1P63158 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgb1P63158 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgb1P63158 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgb1P63158 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgb1P63158 Slc1a2-202ENSMUST00000080210 11595 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgb1P63158 Gm38271-201ENSMUST00000192296 1603 ntBASIC12.3□□□□□ -0.44
Hmgb1P63158 C530044C16Rik-201ENSMUST00000204275 1624 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgb1P63158 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgb1P63158 Gp1ba-202ENSMUST00000108551 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgb1P63158 Bcl2l11-201ENSMUST00000019281 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgb1P63158 Nos3-201ENSMUST00000030834 4132 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgb1P63158 Igf1-201ENSMUST00000062862 2292 ntTSL 2 BASIC12.3□□□□□ -0.44
Hmgb1P63158 Rhbdf2-202ENSMUST00000103029 3593 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgb1P63158 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgb1P63158 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgb1P63158 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgb1P63158 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC12.3□□□□□ -0.44
Hmgb1P63158 C730027H18Rik-201ENSMUST00000218381 2300 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgb1P63158 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgb1P63158 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgb1P63158 Tnfrsf9-205ENSMUST00000116257 2115 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgb1P63158 Gm16219-201ENSMUST00000120096 274 ntBASIC12.3□□□□□ -0.44
Hmgb1P63158 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Hmgb1P63158 Gm9089-201ENSMUST00000122027 526 ntBASIC12.3□□□□□ -0.44
Hmgb1P63158 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC12.3□□□□□ -0.44
Hmgb1P63158 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Hmgb1P63158 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms