Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 4930594O21Rik-201ENSMUST00000129750 629 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cux1P53564 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cux1P53564 Psmb6-ps2-201ENSMUST00000187074 705 ntBASIC16.87■□□□□ 0.29
Cux1P53564 Zfp655-204ENSMUST00000199003 601 ntTSL 2 BASIC16.87■□□□□ 0.29
Cux1P53564 Gm42710-201ENSMUST00000200608 985 ntBASIC16.87■□□□□ 0.29
Cux1P53564 Gm36862-204ENSMUST00000223365 642 ntTSL 3 BASIC16.87■□□□□ 0.29
Cux1P53564 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Cux1P53564 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
Cux1P53564 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Cux1P53564 Rnf170-201ENSMUST00000014022 3929 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cux1P53564 Bcl2-202ENSMUST00000189999 2841 ntBASIC16.87■□□□□ 0.29
Cux1P53564 Snx29-203ENSMUST00000122168 2096 ntTSL 5 BASIC16.87■□□□□ 0.29
Cux1P53564 Tmigd1-202ENSMUST00000102495 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Cux1P53564 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC16.87■□□□□ 0.29
Cux1P53564 Trim34b-202ENSMUST00000180136 1535 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Cux1P53564 Olfr463-203ENSMUST00000217095 1977 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Cux1P53564 Ptprr-206ENSMUST00000148731 2511 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Cux1P53564 Gm45719-201ENSMUST00000207954 1662 ntBASIC16.86■□□□□ 0.29
Cux1P53564 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cux1P53564 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cux1P53564 Wfdc3-202ENSMUST00000109328 726 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cux1P53564 Gm13286-201ENSMUST00000117750 537 ntBASIC16.86■□□□□ 0.29
Cux1P53564 Gm6517-201ENSMUST00000121056 511 ntBASIC16.86■□□□□ 0.29
Cux1P53564 Junos-202ENSMUST00000125438 559 ntTSL 2 BASIC16.86■□□□□ 0.29
Cux1P53564 Gm6425-201ENSMUST00000136332 790 ntBASIC16.86■□□□□ 0.29
Cux1P53564 2410152P15Rik-201ENSMUST00000137405 871 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cux1P53564 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cux1P53564 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC16.86■□□□□ 0.29
Cux1P53564 Eif4e1b-210ENSMUST00000152204 859 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cux1P53564 Gm12847-201ENSMUST00000156219 413 ntTSL 5 BASIC16.86■□□□□ 0.29
Cux1P53564 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC16.86■□□□□ 0.29
Cux1P53564 Gm35239-201ENSMUST00000218346 487 ntTSL 3 BASIC16.86■□□□□ 0.29
Cux1P53564 Mrps18b-201ENSMUST00000025305 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cux1P53564 Gm22341-201ENSMUST00000083775 129 ntBASIC16.86■□□□□ 0.29
Cux1P53564 L3mbtl2-208ENSMUST00000174229 2578 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cux1P53564 Oscp1-203ENSMUST00000143712 1473 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cux1P53564 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cux1P53564 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cux1P53564 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC16.86■□□□□ 0.29
Cux1P53564 Emp1-201ENSMUST00000032330 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cux1P53564 Ndrg4-203ENSMUST00000080666 2738 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cux1P53564 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Cux1P53564 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Cux1P53564 Mir598-201ENSMUST00000102094 79 ntBASIC16.86■□□□□ 0.29
Cux1P53564 Zfand1-202ENSMUST00000108377 936 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cux1P53564 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cux1P53564 Gm8482-201ENSMUST00000117972 471 ntBASIC16.86■□□□□ 0.29
Cux1P53564 Gm13841-201ENSMUST00000118829 483 ntBASIC16.86■□□□□ 0.29
Cux1P53564 Gm11449-201ENSMUST00000119175 476 ntBASIC16.86■□□□□ 0.29
Cux1P53564 Gm12853-201ENSMUST00000134971 442 ntTSL 3 BASIC16.86■□□□□ 0.29
Cux1P53564 Stamos-201ENSMUST00000152524 801 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cux1P53564 Gm24074-201ENSMUST00000158178 260 ntBASIC16.86■□□□□ 0.29
Cux1P53564 Gm17019-201ENSMUST00000167908 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cux1P53564 Rab26-204ENSMUST00000176533 965 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Cux1P53564 Gm8210-201ENSMUST00000178557 483 ntBASIC16.86■□□□□ 0.29
Cux1P53564 Gm15454-201ENSMUST00000179718 483 ntBASIC16.86■□□□□ 0.29
Cux1P53564 Gm31786-201ENSMUST00000212305 564 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Cux1P53564 Calm4-201ENSMUST00000042219 917 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Cux1P53564 Zfp868-201ENSMUST00000074982 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cux1P53564 Gm6344-201ENSMUST00000075962 483 ntBASIC16.86■□□□□ 0.29
Cux1P53564 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Cux1P53564 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Cux1P53564 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC16.85■□□□□ 0.29
Cux1P53564 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Cux1P53564 Dync2li1-201ENSMUST00000025101 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cux1P53564 Pex26-201ENSMUST00000088561 4093 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cux1P53564 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cux1P53564 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cux1P53564 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cux1P53564 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Cux1P53564 Slc17a8-202ENSMUST00000105295 1863 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cux1P53564 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cux1P53564 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cux1P53564 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cux1P53564 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cux1P53564 Igll1-201ENSMUST00000100136 870 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Cux1P53564 Gm16080-201ENSMUST00000152128 692 ntTSL 3 BASIC16.85■□□□□ 0.29
Cux1P53564 Mir133a-1hg-201ENSMUST00000179771 395 ntTSL 3 BASIC16.85■□□□□ 0.29
Cux1P53564 4930444A19Rik-202ENSMUST00000190007 633 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cux1P53564 1700012J22Rik-201ENSMUST00000193492 830 ntBASIC16.85■□□□□ 0.29
Cux1P53564 Gm36982-201ENSMUST00000193796 1128 ntBASIC16.85■□□□□ 0.29
Cux1P53564 Gm5311-201ENSMUST00000203518 709 ntBASIC16.85■□□□□ 0.29
Cux1P53564 Fut1-202ENSMUST00000209379 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cux1P53564 Gm7242-201ENSMUST00000221134 705 ntBASIC16.85■□□□□ 0.29
Cux1P53564 AC165260.2-201ENSMUST00000225371 395 ntBASIC16.85■□□□□ 0.29
Cux1P53564 AC121357.1-201ENSMUST00000227365 608 ntBASIC16.85■□□□□ 0.29
Cux1P53564 Faah-201ENSMUST00000049095 3827 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cux1P53564 Krtap3-2-201ENSMUST00000092699 1031 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Cux1P53564 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Cux1P53564 4930517G19Rik-201ENSMUST00000206152 1676 ntBASIC16.85■□□□□ 0.29
Cux1P53564 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Cux1P53564 Ndst3-202ENSMUST00000124803 1917 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Cux1P53564 Gm38034-201ENSMUST00000193915 2069 ntBASIC16.85■□□□□ 0.29
Cux1P53564 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cux1P53564 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cux1P53564 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Cux1P53564 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cux1P53564 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cux1P53564 Galnt10-201ENSMUST00000066987 4715 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Cux1P53564 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 57.6 ms