Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 Tmem33-201ENSMUST00000037918 6247 ntAPPRIS P3 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccnb1ip1D3Z3K2 St5-204ENSMUST00000168005 3004 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Ccnb1ip1D3Z3K2 Son-201ENSMUST00000114036 7945 ntTSL 5 BASIC9.98□□□□□ -0.81
Ccnb1ip1D3Z3K2 AC171277.1-201ENSMUST00000216902 1441 ntBASIC9.98□□□□□ -0.81
Ccnb1ip1D3Z3K2 Ctso-201ENSMUST00000029649 3468 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Ccnb1ip1D3Z3K2 Greb1l-201ENSMUST00000048977 8414 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Ccnb1ip1D3Z3K2 Gm8706-201ENSMUST00000197372 1491 ntBASIC9.98□□□□□ -0.81
Ccnb1ip1D3Z3K2 Zfp710-203ENSMUST00000166250 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Atl2-201ENSMUST00000068282 3618 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Agbl2-201ENSMUST00000037206 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Numb-210ENSMUST00000154043 1929 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Rpl15-202ENSMUST00000080281 1922 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Snhg17-203ENSMUST00000141809 1553 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Zzef1-201ENSMUST00000069395 11150 ntAPPRIS P2 TSL 5 BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Rrp7a-201ENSMUST00000018184 4363 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Idua-203ENSMUST00000119212 3022 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Tmem108-203ENSMUST00000189066 2145 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Gm29222-201ENSMUST00000185442 2167 ntTSL 5 BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Gm29449-201ENSMUST00000187820 2168 ntTSL 5 BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Gm28104-201ENSMUST00000188331 2168 ntTSL 5 BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Gm28743-201ENSMUST00000189014 2168 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Gm29384-201ENSMUST00000190852 2168 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Gm37538-201ENSMUST00000192417 2168 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Fgd4-204ENSMUST00000161188 2214 ntTSL 2 BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Sun1-205ENSMUST00000110883 3714 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Cdkl5-205ENSMUST00000198931 9796 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Il17ra-201ENSMUST00000002976 7752 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Zfp352-202ENSMUST00000107129 2276 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Olfr287-204ENSMUST00000170618 1776 ntAPPRIS P1 TSL 2 BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Gm12859-201ENSMUST00000117834 427 ntBASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Dusp13-203ENSMUST00000120956 1070 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Mrps17-207ENSMUST00000121813 868 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Gm25661-201ENSMUST00000157704 296 ntBASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Gm5342-201ENSMUST00000181982 1003 ntBASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Gm5745-201ENSMUST00000183748 313 ntBASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Gm9230-201ENSMUST00000188228 532 ntBASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Nme6-206ENSMUST00000197627 905 ntTSL 3 BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Gm44420-201ENSMUST00000203669 490 ntBASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 AC121960.1-201ENSMUST00000227982 564 ntBASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Gm4763-201ENSMUST00000081657 882 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Ttc7b-206ENSMUST00000223020 3307 ntTSL 5 BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Habp2-202ENSMUST00000095948 2815 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Gm5620-201ENSMUST00000077991 1348 ntBASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Gm26686-201ENSMUST00000181951 3467 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Arel1-201ENSMUST00000043169 5446 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Dclk1-203ENSMUST00000167204 6025 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Zzef1-207ENSMUST00000172220 11249 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Cap1-201ENSMUST00000069533 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Elmo2-201ENSMUST00000071699 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Atp6v0a4-202ENSMUST00000114908 3307 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Gm45199-201ENSMUST00000207640 1507 ntBASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Ccnb1ip1D3Z3K2 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Ccnb1ip1D3Z3K2 Raf1-202ENSMUST00000112949 2946 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Ccnb1ip1D3Z3K2 Wipf2-201ENSMUST00000037480 7011 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Ccnb1ip1D3Z3K2 Itgb8-201ENSMUST00000026360 8403 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Ccnb1ip1D3Z3K2 Gpm6b-206ENSMUST00000112228 3083 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Ccnb1ip1D3Z3K2 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Ccnb1ip1D3Z3K2 Ahrr-202ENSMUST00000109640 2419 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Ccnb1ip1D3Z3K2 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC9.96□□□□□ -0.81
Ccnb1ip1D3Z3K2 Stoml3-201ENSMUST00000029307 1780 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Ccnb1ip1D3Z3K2 Erc2-201ENSMUST00000090302 6083 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Ccnb1ip1D3Z3K2 Timm9-208ENSMUST00000221797 2564 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Ccnb1ip1D3Z3K2 Tnfrsf9-204ENSMUST00000105672 1999 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Ccnb1ip1D3Z3K2 Ik-201ENSMUST00000007042 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Ccnb1ip1D3Z3K2 Ntrk3-206ENSMUST00000195262 2774 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Ccnb1ip1D3Z3K2 Tdp1-201ENSMUST00000021594 2019 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Ccnb1ip1D3Z3K2 Pantr1-208ENSMUST00000181660 2085 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Ccnb1ip1D3Z3K2 4930478P22Rik-203ENSMUST00000202026 2060 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Ccnb1ip1D3Z3K2 Mak-202ENSMUST00000070193 2937 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Ccnb1ip1D3Z3K2 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC9.96□□□□□ -0.82
Ccnb1ip1D3Z3K2 Pomgnt1-204ENSMUST00000120083 2953 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Ccnb1ip1D3Z3K2 Rapgef4os2-201ENSMUST00000128165 2116 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Ccnb1ip1D3Z3K2 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC9.96□□□□□ -0.82
Ccnb1ip1D3Z3K2 Rab7b-205ENSMUST00000136247 497 ntTSL 5 BASIC9.96□□□□□ -0.82
Ccnb1ip1D3Z3K2 Rps19-ps11-201ENSMUST00000160308 433 ntBASIC9.96□□□□□ -0.82
Ccnb1ip1D3Z3K2 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC9.96□□□□□ -0.82
Ccnb1ip1D3Z3K2 Gm8652-201ENSMUST00000181363 964 ntBASIC9.96□□□□□ -0.82
Ccnb1ip1D3Z3K2 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Ccnb1ip1D3Z3K2 Gm5597-201ENSMUST00000182353 1193 ntBASIC9.96□□□□□ -0.82
Ccnb1ip1D3Z3K2 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC9.96□□□□□ -0.82
Ccnb1ip1D3Z3K2 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC9.96□□□□□ -0.82
Ccnb1ip1D3Z3K2 Pglyrp1-201ENSMUST00000032573 694 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ccnb1ip1D3Z3K2 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Ccnb1ip1D3Z3K2 Smarca1-202ENSMUST00000088973 4798 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Ccnb1ip1D3Z3K2 4933413C19Rik-201ENSMUST00000162380 2217 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Ccnb1ip1D3Z3K2 Slc34a2-201ENSMUST00000094787 4176 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms