Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Usf3B2RUQ2 Gm20649-201ENSMUST00000160950 2740 ntTSL 2 BASIC9.34□□□□□ -0.91
Usf3B2RUQ2 Rad51ap2-201ENSMUST00000124065 3175 ntAPPRIS P1 TSL 2 BASIC9.34□□□□□ -0.91
Usf3B2RUQ2 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Usf3B2RUQ2 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC9.34□□□□□ -0.92
Usf3B2RUQ2 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Gm11783-201ENSMUST00000119549 885 ntBASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Gzmc-201ENSMUST00000015585 894 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Gm6390-201ENSMUST00000215034 589 ntBASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Gm32828-202ENSMUST00000219198 2111 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Gm18065-201ENSMUST00000221395 526 ntBASIC9.33□□□□□ -0.92
Usf3B2RUQ2 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Sept4-202ENSMUST00000063156 1245 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Styk1-202ENSMUST00000121078 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Kif19a-201ENSMUST00000084368 3433 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Plekhg4-203ENSMUST00000160191 3339 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Snhg18-201ENSMUST00000181536 1486 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Eps8l1-204ENSMUST00000163893 3868 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Als2cl-206ENSMUST00000155014 5150 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Pck1-201ENSMUST00000029017 2661 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Cdk5rap1-202ENSMUST00000109730 1227 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Tcf7l2-204ENSMUST00000111649 982 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Gm13954-201ENSMUST00000123441 543 ntTSL 3 BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Cnfn-202ENSMUST00000167591 698 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Nlrp5-ps-202ENSMUST00000173220 1294 ntBASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Gm25998-201ENSMUST00000175397 53 ntBASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Gm10807-201ENSMUST00000177134 795 ntBASIC9.33□□□□□ -0.92
Usf3B2RUQ2 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Gm29560-201ENSMUST00000191526 881 ntTSL 5 BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Gm9116-201ENSMUST00000192400 1018 ntBASIC9.33□□□□□ -0.92
Usf3B2RUQ2 AC124752.1-201ENSMUST00000222131 776 ntTSL 5 BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Gm43963-201ENSMUST00000203466 2488 ntBASIC9.33□□□□□ -0.92
Usf3B2RUQ2 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Gm45234-201ENSMUST00000129411 4359 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Olfr1495-202ENSMUST00000215930 2025 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Otx2-202ENSMUST00000119070 1708 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Slc25a44-203ENSMUST00000193433 3429 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Gm13135-201ENSMUST00000117628 3121 ntBASIC9.33□□□□□ -0.92
Usf3B2RUQ2 AC125409.1-201ENSMUST00000223213 3370 ntBASIC9.33□□□□□ -0.92
Usf3B2RUQ2 AC164426.2-201ENSMUST00000225993 2492 ntBASIC9.33□□□□□ -0.92
Usf3B2RUQ2 Gm42602-201ENSMUST00000200288 3224 ntBASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Tmc5-203ENSMUST00000121715 3906 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Gm28042-203ENSMUST00000156805 2844 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Kat7-205ENSMUST00000107734 3560 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Mfsd11-212ENSMUST00000153084 1194 ntTSL 5 BASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Gm24248-201ENSMUST00000157321 322 ntBASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Mir6973a-201ENSMUST00000183646 78 ntBASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Gm18706-201ENSMUST00000210053 1066 ntBASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Gm7940-201ENSMUST00000218195 769 ntBASIC9.32□□□□□ -0.92
Usf3B2RUQ2 CT573086.4-201ENSMUST00000226729 342 ntBASIC9.32□□□□□ -0.92
Usf3B2RUQ2 BC030499-201ENSMUST00000046361 959 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Atg14-202ENSMUST00000226299 3729 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Chrne-201ENSMUST00000014753 1616 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Tenm2-202ENSMUST00000102801 9908 ntAPPRIS P2 TSL 5 BASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Abi1-206ENSMUST00000126112 3360 ntAPPRIS ALT1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Gm38089-201ENSMUST00000193585 1514 ntBASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Gm45199-201ENSMUST00000207640 1507 ntBASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Gm23272-201ENSMUST00000104053 129 ntBASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC9.32□□□□□ -0.92
Usf3B2RUQ2 Nudt7-204ENSMUST00000134593 707 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms